RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MORC2Q9Y6X9 1032 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-201ENST00000270061 LOC102724159A0A0B4J2E5 919 aa27.95■■■□□ 2.06
SSBP4-201ENST00000270061 ADCYAP1R1P41586 468 aa27.95■■■□□ 2.06
SSBP4-201ENST00000270061 MRE11P49959 708 aa27.95■■■□□ 2.06
SSBP4-201ENST00000270061 PWP2Q15269 919 aaKnown RBP27.95■■■□□ 2.06
SSBP4-201ENST00000270061 MTMR8Q96EF0 704 aa27.95■■■□□ 2.06
SSBP4-201ENST00000270061 AMNQ9BXJ7 453 aa27.95■■■□□ 2.06
SSBP4-201ENST00000270061 MRPL11Q9Y3B7 192 aaKnown RBP27.95■■■□□ 2.06
SSBP4-201ENST00000270061 ZBTB5O15062 677 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 ADCY6O43306 1168 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 WWC2Q6AWC2 1192 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 EEPD1Q7L9B9 569 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 DAGLBQ8NCG7 672 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 MORC4Q8TE76 937 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 FERMT2Q96AC1 680 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 MAF1Q9H063 256 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 DACT1Q9NYF0 836 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 COLQQ9Y215 455 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-201ENST00000270061 hCG_1984214I3L0E3 225 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 STXBP3O00186 592 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 CHRDL2Q6WN34 429 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 MCF2L2Q86YR7 1114 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 ZNF713Q8N859 430 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-201ENST00000270061 DNERQ8NFT8 737 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 MPHOSPH6Q99547 160 aaKnown RBP27.94■■■□□ 2.06
SSBP4-201ENST00000270061 SPC25Q9HBM1 224 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 PCDHA4Q9UN74 947 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 PHF24Q9UPV7 400 aa27.94■■■□□ 2.06
SSBP4-201ENST00000270061 TNFAIP2Q03169 654 aa27.93■■■□□ 2.06
SSBP4-201ENST00000270061 AXDND1Q5T1B0 1012 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-201ENST00000270061 HOMER1Q86YM7 354 aa27.93■■■□□ 2.06
SSBP4-201ENST00000270061 FBXO16Q8IX29 292 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-201ENST00000270061 CCDC12Q8WUD4 166 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-201ENST00000270061 GPKOWQ92917 476 aaPredicted RBP eCLIP27.93■■■□□ 2.06
SSBP4-201ENST00000270061 VTA1Q9NP79 307 aa27.93■■■□□ 2.06
SSBP4-201ENST00000270061 SEC63Q9UGP8 760 aaKnown RBP27.93■■■□□ 2.06
SSBP4-201ENST00000270061 ZMYND8Q9ULU4 1186 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-201ENST00000270061 NR1I2O75469 434 aa27.92■■■□□ 2.06
SSBP4-201ENST00000270061 SLC39A5Q6ZMH5 540 aa27.92■■■□□ 2.06
SSBP4-201ENST00000270061 BLIDQ8IZY5 108 aa27.92■■■□□ 2.06
SSBP4-201ENST00000270061 TSEN34Q9BSV6 310 aaKnown RBP27.92■■■□□ 2.06
SSBP4-201ENST00000270061 GRPEL1Q9HAV7 217 aa27.92■■■□□ 2.06
SSBP4-201ENST00000270061 CEP131Q9UPN4 1083 aa27.92■■■□□ 2.06
SSBP4-201ENST00000270061 C6orf222P0C671 652 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-201ENST00000270061 TYW1BQ6NUM6 668 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 KLHDC9Q8NEP7 349 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 ENGASEQ8NFI3 743 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 MRPS27Q92552 414 aaKnown RBP27.91■■■□□ 2.06
SSBP4-201ENST00000270061 NUP62CLQ9H1M0 184 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 NOL7Q9UMY1 257 aaKnown RBP27.91■■■□□ 2.06
SSBP4-201ENST00000270061 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-201ENST00000270061 TRAPPC10P48553 1259 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 CCDC73Q6ZRK6 1079 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 HEATR3Q7Z4Q2 680 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 TBC1D5Q92609 795 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 PIGSQ96S52 555 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 CLSTN2Q9H4D0 955 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 PCDHA1Q9Y5I3 950 aa27.91■■■□□ 2.06
SSBP4-201ENST00000270061 M0R2N6 131 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 SYN1P17600 705 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 CMA1P23946 247 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 GJA9P57773 515 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 FAM160A1Q05DH4 1040 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 SNW1Q13573 536 aaKnown RBP27.9■■■□□ 2.06
SSBP4-201ENST00000270061 EARS2Q5JPH6 523 aaKnown RBP27.9■■■□□ 2.06
SSBP4-201ENST00000270061 TAPT1Q6NXT6 567 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 FSIP1Q8NA03 581 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 ZMYND12Q9H0C1 365 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 UPF3AQ9H1J1 476 aaKnown RBP27.9■■■□□ 2.06
SSBP4-201ENST00000270061 GOLPH3LQ9H4A5 285 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 PDGFCQ9NRA1 345 aa27.9■■■□□ 2.06
SSBP4-201ENST00000270061 B4DLN1 442 aa27.89■■■□□ 2.06
SSBP4-201ENST00000270061 PPP1R11O60927 126 aaPredicted RBP27.89■■■□□ 2.06
SSBP4-201ENST00000270061 CST5P28325 142 aaPredicted RBP27.89■■■□□ 2.06
SSBP4-201ENST00000270061 MRPL12P52815 198 aaKnown RBP27.89■■■□□ 2.06
SSBP4-201ENST00000270061 RTP1P59025 263 aa27.89■■■□□ 2.06
SSBP4-201ENST00000270061 PDE4DQ08499 809 aa27.89■■■□□ 2.06
SSBP4-201ENST00000270061 TRAF1Q13077 416 aa27.89■■■□□ 2.06
SSBP4-201ENST00000270061 HABP4Q5JVS0 413 aaKnown RBP27.89■■■□□ 2.06
SSBP4-201ENST00000270061 IQSEC1Q6DN90 963 aa27.89■■■□□ 2.06
SSBP4-201ENST00000270061 A0A1W2PQ45 241 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-201ENST00000270061 A0A1W2PQY0 241 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 MYADML2A6NDP7 307 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 MOXD2PA6NHM9 499 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 BMP15O95972 392 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 KCNA10Q16322 511 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 RBM43Q6ZSC3 357 aaKnown RBP27.88■■■□□ 2.05
SSBP4-201ENST00000270061 PCSK9Q8NBP7 692 aaKnown RBP27.88■■■□□ 2.05
SSBP4-201ENST00000270061 SYTL5Q8TDW5 730 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-201ENST00000270061 ATP11BQ9Y2G3 1177 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 PCDHB6Q9Y5E3 794 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 ESYT2A0FGR8 921 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 CUTAO60888 179 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 MARCKSP29966 332 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-201ENST00000270061 ACLYP53396 1101 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 SNX17Q15036 470 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 GNASQ5JWF2 1037 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 GNEQ9Y223 722 aaKnown RBP27.88■■■□□ 2.05
SSBP4-201ENST00000270061 KIAA1217Q5T5P2 1943 aa27.88■■■□□ 2.05
SSBP4-201ENST00000270061 PNMA6FA0A0J9YX94 578 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms