RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 USP17L19D6RCP7 530 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 USP17L20D6RJB6 530 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 TULP1O00294 542 aaPredicted RBP21.16■□□□□ 0.98
CPNE7-201ENST00000268720 CLK2P49760 499 aaKnown RBP21.16■□□□□ 0.98
CPNE7-201ENST00000268720 DNM2P50570 870 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 USP17L24Q0WX57 530 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 USP17L6PQ6QN14 398 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 TRAPPC11Q7Z392 1133 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 ZNF219Q9P2Y4 722 aaPredicted RBP21.16■□□□□ 0.98
CPNE7-201ENST00000268720 CAPN11Q9UMQ6 739 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 ZBTB5O15062 677 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 TUBB2AQ13885 445 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 ZNF622Q969S3 477 aaKnown RBP eCLIP21.16■□□□□ 0.988e-8■□□□□ 10.8
CPNE7-201ENST00000268720 CCDC47Q96A33 483 aaKnown RBP21.16■□□□□ 0.98
CPNE7-201ENST00000268720 CDK5RAP3Q96JB5 506 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 TUBB2BQ9BVA1 445 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 TTYH3Q9C0H2 523 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 SALL4Q9UJQ4 1053 aa21.16■□□□□ 0.98
CPNE7-201ENST00000268720 TRIM66O15016 1216 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 HLA-DOAP06340 250 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 RRAGAQ7L523 313 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 SAR1BQ9Y6B6 198 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 BICDL2A1A5D9 508 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 EIF3JO75822 258 aaKnown RBP21.15■□□□□ 0.98
CPNE7-201ENST00000268720 ALDH1B1P30837 517 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 ORC2Q13416 577 aaPredicted RBP21.15■□□□□ 0.98
CPNE7-201ENST00000268720 CNNM4Q6P4Q7 775 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 NFRKBQ6P4R8 1299 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 PROCA1Q8NCQ7 364 aaPredicted RBP21.15■□□□□ 0.98
CPNE7-201ENST00000268720 MYO1AQ9UBC5 1043 aa21.15■□□□□ 0.98
CPNE7-201ENST00000268720 VGLL3A8MV65 326 aa21.14■□□□□ 0.98
CPNE7-201ENST00000268720 STAT3P40763 770 aa21.14■□□□□ 0.98
CPNE7-201ENST00000268720 SEMA3FQ13275 785 aa21.14■□□□□ 0.98
CPNE7-201ENST00000268720 TMEM266Q2M3C6 531 aa21.14■□□□□ 0.98
CPNE7-201ENST00000268720 CUL5Q93034 780 aa21.14■□□□□ 0.98
CPNE7-201ENST00000268720 PSTPIP2Q9H939 334 aa21.14■□□□□ 0.98
CPNE7-201ENST00000268720 DDX25Q9UHL0 483 aaKnown RBP21.14■□□□□ 0.98
CPNE7-201ENST00000268720 RBM5P52756 815 aaKnown RBP eCLIP21.14■□□□□ 0.97
CPNE7-201ENST00000268720 GFPT1Q06210 699 aaPredicted RBP21.14■□□□□ 0.97
CPNE7-201ENST00000268720 TTC19Q6DKK2 380 aaPredicted RBP21.14■□□□□ 0.97
CPNE7-201ENST00000268720 ARHGAP20Q9P2F6 1191 aa21.14■□□□□ 0.97
CPNE7-201ENST00000268720 PACSIN2Q9UNF0 486 aaPredicted RBP21.14■□□□□ 0.97
CPNE7-201ENST00000268720 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
CPNE7-201ENST00000268720 GPATCH4Q5T3I0 446 aaKnown RBP21.13■□□□□ 0.97
CPNE7-201ENST00000268720 CENPPQ6IPU0 288 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 SH3BP5LQ7L8J4 393 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 RAD54LQ92698 747 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 DDX12PQ92771 950 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 LRRC53A6NM62 1247 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 MARCH6O60337 910 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 ACTN2P35609 894 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 EIF4A3P38919 411 aaKnown RBP21.13■□□□□ 0.97
CPNE7-201ENST00000268720 NAP1L1P55209 391 aaKnown RBP21.13■□□□□ 0.97
CPNE7-201ENST00000268720 PDIA5Q14554 519 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 DNAJC21Q5F1R6 531 aaKnown RBP21.13■□□□□ 0.97
CPNE7-201ENST00000268720 MUM1L1Q5H9M0 696 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 KRT79Q5XKE5 535 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 PPP4R3AQ6IN85 833 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 UNC13DQ70J99 1090 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 NOC3LQ8WTT2 800 aaKnown RBP21.13■□□□□ 0.97
CPNE7-201ENST00000268720 MS4A14Q96JA4 679 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 CCDC42Q96M95 316 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 DEF6Q9H4E7 631 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 HAUS4Q9H6D7 363 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 STK17AQ9UEE5 414 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 FAM198AQ9UFP1 575 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 QSER1Q2KHR3 1735 aa21.13■□□□□ 0.97
CPNE7-201ENST00000268720 PSMD14O00487 310 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 USP14P54578 494 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 HSP90B2PQ58FF3 399 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 SAMD1Q6SPF0 538 aaPredicted RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 BBXQ8WY36 941 aaPredicted RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MTMR8Q96EF0 704 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MASTLQ96GX5 879 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 FEZ2Q9UHY8 353 aaPredicted RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MYH4Q9Y623 1939 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MYO3BQ8WXR4 1341 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MYH7BA7E2Y1 1941 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 ZSCAN29Q8IWY8 852 aaPredicted RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 C10orf67Q8IYJ2 551 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 GOLGA5Q8TBA6 731 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 AKT1S1Q96B36 256 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 GOLPH3Q9H4A6 298 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 E9PMD0 336 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 PDE6BP35913 854 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MRPL12P52815 198 aaKnown RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 ZDHHC15Q96MV8 337 aa21.12■□□□□ 0.97
CPNE7-201ENST00000268720 ZNHIT6Q9NWK9 470 aaKnown RBP21.12■□□□□ 0.97
CPNE7-201ENST00000268720 MYH10P35580 1976 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 PODNQ7Z5L7 613 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 RAB34Q9BZG1 259 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 IKZF4Q9H2S9 585 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 FAM204AQ9H8W3 233 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 PSD3Q9NYI0 1048 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 PCDHA12Q9UN75 941 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 NRXN2Q9P2S2 1712 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 SLC1A4P43007 532 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms