RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ANKRD20A3Q5VUR7 823 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS33A-201ENST00000267199 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS33A-201ENST00000267199 CIB2O75838 187 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 MYL1P05976 194 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 CYP2J2P51589 502 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 GJA10Q969M2 543 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 MTA3Q9BTC8 594 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 XDHP47989 1333 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-201ENST00000267199 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
VPS33A-201ENST00000267199 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-201ENST00000267199 MINPP1Q9UNW1 487 aa12.62□□□□□ -0.39
VPS33A-201ENST00000267199 SLC16A2P36021 539 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 KCNJ6P48051 423 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 CCDC62Q6P9F0 684 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 CPXCR1Q8N123 301 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 NCAPGQ9BPX3 1015 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 FUT8Q9BYC5 575 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 PP2D1A8MPX8 630 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 SUN1O94901 812 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 IFNB1P01574 187 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 CSF1RP07333 972 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.398e-7■■□□□ 12
VPS33A-201ENST00000267199 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
VPS33A-201ENST00000267199 PGRMC1O00264 195 aaKnown RBP12.61□□□□□ -0.39
VPS33A-201ENST00000267199 SMIM24O75264 130 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 BIRC3Q13489 604 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 REXO1L1PQ8IX06 675 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-201ENST00000267199 ELAC2Q9BQ52 826 aaKnown RBP12.61□□□□□ -0.39
VPS33A-201ENST00000267199 NDST4Q9H3R1 872 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 RCAN1P53805 252 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 MUM1L1Q5H9M0 696 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 RBM43Q6ZSC3 357 aaKnown RBP12.61□□□□□ -0.39
VPS33A-201ENST00000267199 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 PNKPQ96T60 521 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 PLA2G12BQ9BX93 195 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 FAM114A2Q9NRY5 505 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 DAAM1Q9Y4D1 1078 aa12.61□□□□□ -0.39
VPS33A-201ENST00000267199 GAS8O95995 478 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 NR2F2P24468 414 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 GBP5Q96PP8 586 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 THAP12O43422 761 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 GAS7O60861 476 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 HSPA1LP34931 641 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 OTUD6AQ7L8S5 288 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 TAB3Q8N5C8 712 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-201ENST00000267199 LRRC1Q9BTT6 524 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 ACTR5Q9H9F9 607 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-201ENST00000267199 STK17AQ9UEE5 414 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 GRIN1Q05586 938 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-201ENST00000267199 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 PACSIN2Q9UNF0 486 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-201ENST00000267199 C1orf167Q5SNV9 1468 aa12.6□□□□□ -0.39
VPS33A-201ENST00000267199 HMGB1P1B2RPK0 211 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 H3BQF6 201 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 HARSP12081 509 aaKnown RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 ATP2A2P16615 1042 aaKnown RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 ADCY8P40145 1251 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 THOC1Q96FV9 657 aaKnown RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 TBK1Q9UHD2 729 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 LRRD1A4D1F6 860 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 BAG2O95816 211 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 PALMO75781 387 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 CDK8P49336 464 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 MESDQ14696 234 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 RASIP1Q5U651 963 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 DNAJC17Q9NVM6 304 aaKnown RBP12.59□□□□□ -0.39
VPS33A-201ENST00000267199 SMARCAL1Q9NZC9 954 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
VPS33A-201ENST00000267199 BCRP11274 1271 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms