RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 C9orf50Q5SZB4 431 aa22.67■■□□□ 1.22
CASP6-201ENST00000265164 IQSEC1Q6DN90 963 aa22.67■■□□□ 1.22
CASP6-201ENST00000265164 FOXD4L3Q6VB84 417 aaPredicted RBP22.67■■□□□ 1.22
CASP6-201ENST00000265164 DIS3L2Q8IYB7 885 aaKnown RBP22.67■■□□□ 1.22
CASP6-201ENST00000265164 BRMS1Q9HCU9 246 aa22.67■■□□□ 1.22
CASP6-201ENST00000265164 EYSQ5T1H1 3165 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 KIAA0355O15063 1070 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 CDK7P50613 346 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 CXCL17Q6UXB2 119 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 BRAPQ7Z569 592 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 VTI1AQ96AJ9 217 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 TOX2Q96NM4 488 aa22.66■■□□□ 1.22
CASP6-201ENST00000265164 FOXP1Q9H334 677 aaPredicted RBP22.66■■□□□ 1.22
CASP6-201ENST00000265164 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
CASP6-201ENST00000265164 NAPAP54920 295 aa22.65■■□□□ 1.22
CASP6-201ENST00000265164 SHHQ15465 462 aa22.65■■□□□ 1.22
CASP6-201ENST00000265164 FSCN1Q16658 493 aaKnown RBP22.65■■□□□ 1.22
CASP6-201ENST00000265164 GALNT17Q6IS24 598 aa22.65■■□□□ 1.22
CASP6-201ENST00000265164 TYW1BQ6NUM6 668 aa22.65■■□□□ 1.22
CASP6-201ENST00000265164 Q7L0L9 218 aa22.65■■□□□ 1.22
CASP6-201ENST00000265164 TMEM39AQ9NV64 488 aa22.65■■□□□ 1.22
CASP6-201ENST00000265164 LOC102724159A0A0B4J2E5 919 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 A0A0U1RQG5 324 aaPredicted RBP22.64■■□□□ 1.21
CASP6-201ENST00000265164 DCDC2CA8MYV0 355 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 BTBD18B2RXH4 712 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 KIF28PB7ZC32 967 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 PPP1R11O60927 126 aaPredicted RBP22.64■■□□□ 1.21
CASP6-201ENST00000265164 EDNRBP24530 442 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 KRT2P35908 639 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 PWP2Q15269 919 aaKnown RBP22.64■■□□□ 1.21
CASP6-201ENST00000265164 DNERQ8NFT8 737 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 AP5M1Q9H0R1 490 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 COL20A1Q9P218 1284 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 ABCB11O95342 1321 aa22.64■■□□□ 1.21
CASP6-201ENST00000265164 ARVCFO00192 962 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 RAG1P15918 1043 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 DUSP28Q4G0W2 176 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 PPP1R18Q6NYC8 613 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 FBXO11Q86XK2 927 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 AMNQ9BXJ7 453 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 WDR11Q9BZH6 1224 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 ZMYND12Q9H0C1 365 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 PCDHA4Q9UN74 947 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 Q9Y3F1 56 aa22.63■■□□□ 1.21
CASP6-201ENST00000265164 RBM47A0AV96 593 aaKnown RBP22.62■■□□□ 1.21
CASP6-201ENST00000265164 ESYT2A0FGR8 921 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 EPHB4P54760 987 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 DNM1Q05193 864 aaKnown RBP22.62■■□□□ 1.21
CASP6-201ENST00000265164 PDE4DQ08499 809 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 TRAF1Q13077 416 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 NPY5RQ15761 445 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 GPR153Q6NV75 609 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 FAM173BQ6P4H8 233 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 CHAMP1Q96JM3 812 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 C6orf50Q9HD87 102 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 TBX21Q9UL17 535 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 PCDHA1Q9Y5I3 950 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 KIAA1217Q5T5P2 1943 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 SMCO2A6NFE2 343 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 GNA11P29992 359 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 NOSTRINQ8IVI9 506 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 FAM126BQ8IXS8 530 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 BLIDQ8IZY5 108 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 DAGLBQ8NCG7 672 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 OXER1Q8TDS5 423 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 SYTL5Q8TDW5 730 aaPredicted RBP22.62■■□□□ 1.21
CASP6-201ENST00000265164 TAAR1Q96RJ0 339 aa22.62■■□□□ 1.21
CASP6-201ENST00000265164 GRIN2DO15399 1336 aa22.61■■□□□ 1.21
CASP6-201ENST00000265164 MROH7Q68CQ1 1323 aa22.61■■□□□ 1.21
CASP6-201ENST00000265164 OPLAHO14841 1288 aa22.61■■□□□ 1.21
CASP6-201ENST00000265164 NR5A1Q13285 461 aa22.61■■□□□ 1.21
CASP6-201ENST00000265164 DEFB123Q8N688 67 aa22.61■■□□□ 1.21
CASP6-201ENST00000265164 MCM4P33991 863 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 PSMC6P62333 389 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 KRT85P78386 507 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 NFKBIBQ15653 356 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 ATL3Q6DD88 541 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 SLC43A3Q8NBI5 491 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 BICD2Q8TD16 824 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 COPS5Q92905 334 aa22.6■■□□□ 1.21
CASP6-201ENST00000265164 ZNF396Q96N95 335 aaPredicted RBP22.6■■□□□ 1.21
CASP6-201ENST00000265164 GOLGA6L22H0YM25 854 aa22.59■■□□□ 1.21
CASP6-201ENST00000265164 NCLP19338 710 aaKnown RBP22.59■■□□□ 1.21
CASP6-201ENST00000265164 ADCY7P51828 1080 aa22.59■■□□□ 1.21
CASP6-201ENST00000265164 ITGA7Q13683 1181 aa22.59■■□□□ 1.21
CASP6-201ENST00000265164 MYSM1Q5VVJ2 828 aa22.59■■□□□ 1.21
CASP6-201ENST00000265164 MRPL11Q9Y3B7 192 aaKnown RBP22.59■■□□□ 1.21
CASP6-201ENST00000265164 ARIH2O95376 493 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 TIMP1P01033 207 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 CD4P01730 458 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 FPGSQ05932 587 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 OR6J1Q8NGC5 347 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 TNFRSF25Q93038 417 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 MPHOSPH6Q99547 160 aaKnown RBP22.58■■□□□ 1.21
CASP6-201ENST00000265164 GLT8D2Q9H1C3 349 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 CFAP45Q9UL16 551 aa22.58■■□□□ 1.21
CASP6-201ENST00000265164 ZEB2O60315 1214 aa22.57■■□□□ 1.2
CASP6-201ENST00000265164 CABYRO75952 493 aa22.57■■□□□ 1.2
CASP6-201ENST00000265164 MRPL12P52815 198 aaKnown RBP22.57■■□□□ 1.2
CASP6-201ENST00000265164 MCF2L2Q86YR7 1114 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms