RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 EIF2AK2P19525 551 aaKnown RBP15.28■□□□□ 0.04
CDH3-201ENST00000264012 BPIFB4P59827 614 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 BHMT2Q9H2M3 363 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 PCIF1Q9H4Z3 704 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 TMEM206Q9H813 350 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 STIM2Q9P246 746 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 GDAQ9Y2T3 454 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 VPS41P49754 854 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 TFDP1Q14186 410 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 HADHQ16836 314 aaKnown RBP15.28■□□□□ 0.04
CDH3-201ENST00000264012 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 CCDC125Q86Z20 511 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 DPH5Q9H2P9 285 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 GOLPH3LQ9H4A5 285 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 VPS37BQ9H9H4 285 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 PLCB1Q9NQ66 1216 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 HESX1Q9UBX0 185 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 CCND2P30279 289 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 POLR2BP30876 1174 aaKnown RBP15.27■□□□□ 0.04
CDH3-201ENST00000264012 GPSM2P81274 684 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 SLC27A3Q5K4L6 730 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 MIS18BP1Q6P0N0 1132 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 CASC4Q6P4E1 433 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 FMR1NBQ8N0W7 255 aaPredicted RBP15.27■□□□□ 0.04
CDH3-201ENST00000264012 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.27■□□□□ 0.04
CDH3-201ENST00000264012 SOWAHDA6NJG2 315 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 STAM2O75886 525 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 SCYL2Q6P3W7 929 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 DPP9Q86TI2 863 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 ACRBPQ8NEB7 543 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 RABGGTAQ92696 567 aa15.27■□□□□ 0.04
CDH3-201ENST00000264012 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
CDH3-201ENST00000264012 PPANQ9NQ55 473 aaKnown RBP15.27■□□□□ 0.04
CDH3-201ENST00000264012 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 ATF7P17544 494 aaPredicted RBP15.27■□□□□ 0.03
CDH3-201ENST00000264012 HOXA7P31268 230 aaPredicted RBP15.27■□□□□ 0.03
CDH3-201ENST00000264012 LRRC63Q05C16 580 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 CUL4BQ13620 913 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 PPP2R5DQ14738 602 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 KRT31Q15323 416 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 HHATQ5VTY9 493 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 FYB2Q5VWT5 728 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 CEP57Q86XR8 500 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 C10orf67Q8IYJ2 551 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 RSAD2Q8WXG1 361 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.03
CDH3-201ENST00000264012 NDST4Q9H3R1 872 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 INO80B-WBP1J3KQ70 363 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 ECE2O60344 883 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 LRRN2O75325 713 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 GRM4Q14833 912 aa15.27■□□□□ 0.03
CDH3-201ENST00000264012 INO80BQ9C086 356 aaPredicted RBP15.27■□□□□ 0.03
CDH3-201ENST00000264012 CTTNQ14247 550 aaKnown RBP15.26■□□□□ 0.03
CDH3-201ENST00000264012 TCP11X2Q5H9J9 407 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 CEP85LQ5SZL2 805 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 LGSNQ5TDP6 509 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 NACA2Q9H009 215 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 ADCY8P40145 1251 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 NAA35Q5VZE5 725 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 ZNF34Q8IZ26 560 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 EXOSC10Q01780 885 aaKnown RBP15.26■□□□□ 0.03
CDH3-201ENST00000264012 MESDQ14696 234 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 FAM133AQ8N9E0 248 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.26■□□□□ 0.03
CDH3-201ENST00000264012 RAB3IL1Q8TBN0 382 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 GRK7Q8WTQ7 553 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 GCNT4Q9P109 453 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 POTEMA6NI47 508 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 MYO1FO00160 1098 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 RGS16O15492 202 aaPredicted RBP15.26■□□□□ 0.03
CDH3-201ENST00000264012 ORC4O43929 436 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 CASP1P29466 404 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 MIS12Q9H081 205 aa15.26■□□□□ 0.03
CDH3-201ENST00000264012 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDH3-201ENST00000264012 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 KRT81Q14533 505 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 TXNRD1Q16881 649 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 MAP7D1Q3KQU3 841 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 SARM1Q6SZW1 724 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 SMIM5Q71RC9 77 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 HINFPQ9BQA5 517 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 MYO3BQ8WXR4 1341 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 CSF1RP07333 972 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 RIOK1Q9BRS2 568 aaKnown RBP15.25■□□□□ 0.03
CDH3-201ENST00000264012 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 TTLL3Q9Y4R7 772 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 ZNF609O15014 1411 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms