RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PCDHA6Q9UN73 950 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 PCDHA8Q9Y5H6 950 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 BTNL10A8MVZ5 291 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 RAD51CO43502 376 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 FCER1AP12319 257 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 ORC2Q13416 577 aaPredicted RBP13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 RPS6KA1Q15418 735 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 TMEM59LQ9UK28 342 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 FLT1P17948 1338 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 ZSCAN5CA6NGD5 496 aaPredicted RBP13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 PSMD2Q13200 908 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 INF2Q27J81 1249 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 HGSNATQ68CP4 663 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 CPLX4Q7Z7G2 160 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
CHMP2B-201ENST00000263780 USP17L12C9JPN9 530 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 USP17L21D6R901 530 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 H0YGN5 161 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 FTCDO95954 541 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 SCTRP47872 440 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 EHHADHQ08426 723 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 SLC18A3Q16572 532 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 CCDC152Q4G0S7 254 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 ADGRA1Q86SQ6 560 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 OSBPL7Q9BZF2 842 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 NFS1Q9Y697 457 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 DLEC1Q9Y238 1755 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 CCDC188H7C350 402 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 ATF3P18847 181 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 EIF3BP55884 814 aaKnown RBP13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 SPDYCQ5MJ68 293 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 SCLT1Q96NL6 688 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 SLC39A2Q9NP94 309 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 LEMD3Q9Y2U8 911 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 RREB1Q92766 1687 aa13.61□□□□□ -0.23
CHMP2B-201ENST00000263780 CYP2D7A0A087X1C5 515 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 A0A0G2JS52 829 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 TSPY2A6NKD2 308 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 ZNF844Q08AG5 666 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 MSL1Q68DK7 614 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 DGKHQ86XP1 1220 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 KLHL7Q8IXQ5 586 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 ANKS4BQ8N8V4 417 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 RASGRP4Q8TDF6 673 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 TATDN2Q93075 761 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 BCCIPQ9P287 314 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 TPX2Q9ULW0 747 aaKnown RBP13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 MYH10P35580 1976 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 DNM1LO00429 736 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 GNA14O95837 355 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 KIAA0753Q2KHM9 967 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 SCFD2Q8WU76 684 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 RAPGEF5Q92565 580 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 LZTS2Q9BRK4 669 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 CRNKL1Q9BZJ0 848 aaKnown RBP13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 HAUS2Q9NVX0 235 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
CHMP2B-201ENST00000263780 SNAP23O00161 211 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 MGRN1O60291 552 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 GSTA1P08263 222 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 SLC8A3P57103 927 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 ERVK-9P63128 1117 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 FAM83BQ5T0W9 1011 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 LMBR1Q8WVP7 490 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 ANKS1AQ92625 1134 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 HVCN1Q96D96 273 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 RSRC1Q96IZ7 334 aaKnown RBP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 POLD4Q9HCU8 107 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 ATP8A2Q9NTI2 1148 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 ARPP21Q9UBL0 812 aaPredicted RBP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 KLRC1P26715 233 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 DYNLL1P63167 89 aaKnown RBP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 SBK1Q52WX2 424 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 UBLCP1Q8WVY7 318 aaPredicted RBP13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 CDK5RAP3Q96JB5 506 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 CARD10Q9BWT7 1032 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 SLITRK6Q9H5Y7 841 aa13.59□□□□□ -0.23
CHMP2B-201ENST00000263780 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms