RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 LRRC27Q9C0I9 530 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 PVALEFA0A1B0GWK0 134 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 TRIM49BA6NDI0 452 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 FDX1P10109 184 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 PMS1P54277 932 aaKnown RBP17.67■□□□□ 0.42
VPS26A-201ENST00000263559 GSDMDP57764 484 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 GHRHRQ02643 423 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 STIM1Q13586 685 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 HAUS3Q68CZ6 603 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 ERMNQ8TAM6 284 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 SPATA31C1P0DKV0 1188 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 CNNM4Q6P4Q7 775 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
VPS26A-201ENST00000263559 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 MEIS1O00470 390 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 POTEIP0CG38 1075 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 RPA1P27694 616 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 DSG3P32926 999 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 VGLL4Q14135 290 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 NOLC1Q14978 699 aaKnown RBP eCLIP17.66■□□□□ 0.42
VPS26A-201ENST00000263559 NR1I3Q14994 352 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 POTEGQ6S5H5 508 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 POTEEQ6S8J3 1075 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 TRERF1Q96PN7 1200 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 RBBP6Q7Z6E9 1792 aaKnown RBP17.66■□□□□ 0.42
VPS26A-201ENST00000263559 RPTORQ8N122 1335 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 A0A1B0GTH6 734 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 PSMA7O14818 248 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 PSMD10O75832 226 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 SSBP05455 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
VPS26A-201ENST00000263559 PLA2G4BP0C869 781 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 ARP10275 920 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 COG2Q14746 738 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 KIAA0895Q8NCT3 520 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 SYTL5Q8TDW5 730 aaPredicted RBP17.66■□□□□ 0.42
VPS26A-201ENST00000263559 SLC5A5Q92911 643 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 DNAJC19Q96DA6 116 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 SLC39A2Q9NP94 309 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 TMOD4Q9NZQ9 345 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 RIPK3Q9Y572 518 aa17.66■□□□□ 0.42
VPS26A-201ENST00000263559 EML1O00423 815 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 IDEP14735 1019 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 ARMCX5Q6P1M9 558 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 KRT26Q7Z3Y9 468 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 DHTKD1Q96HY7 919 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 ADAMTS5Q9UNA0 930 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 WDR90Q96KV7 1748 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 PSMC6P62333 389 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 RPS6P62753 249 aaKnown RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 LRCH2Q5VUJ6 765 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 GTPBP4Q9BZE4 634 aaKnown RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 MAP3K20Q9NYL2 800 aaKnown RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 RABGAP1Q9Y3P9 1069 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 STK24Q9Y6E0 443 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 OTOFQ9HC10 1997 aa17.65■□□□□ 0.42
VPS26A-201ENST00000263559 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 EIF2AK1Q9BQI3 630 aaKnown RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
VPS26A-201ENST00000263559 ITGB5P18084 799 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 CCZ1BP86790 482 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 CCZ1P86791 482 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-201ENST00000263559 CYP4A11Q02928 519 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 EHHADHQ08426 723 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 COBLL1Q53SF7 1204 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 TTI2Q6NXR4 508 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 SAMD3Q8N6K7 520 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 L3MBTL3Q96JM7 780 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-201ENST00000263559 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 ZNF577Q9BSK1 485 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 PAPPA2Q9BXP8 1791 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 TEX33O43247 280 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 SETQ01105 290 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-201ENST00000263559 SH3D19Q5HYK7 790 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 IRF2BP1Q8IU81 584 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 CTAGE1Q96RT6 745 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 POLR3CQ9BUI4 534 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-201ENST00000263559 BMP2KQ9NSY1 1161 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-201ENST00000263559 RGL1Q9NZL6 768 aa17.64■□□□□ 0.41
VPS26A-201ENST00000263559 PTPRFP10586 1907 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 SKILP12757 684 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 CCNE1P24864 410 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 SLC12A3P55017 1021 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 PPP2R5CQ13362 524 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 KRT31Q15323 416 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 SNRNP48Q6IEG0 339 aaKnown RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 RNF207Q6ZRF8 634 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 USP50Q70EL3 339 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 GPBP1Q86WP2 473 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 CCDC150Q8NCX0 1101 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 P2RX5Q93086 422 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms