RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SKA2Q8WVK7 121 aaPredicted RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 GDAQ9Y2T3 454 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 MGEA5O60502 916 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 DR1Q01658 176 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 TRMT10CQ7L0Y3 403 aaKnown RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 PTPRTO14522 1441 aa13.08□□□□□ -0.31
SMG6-201ENST00000263073 A0A0G2JND7 137 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 RASGRF2O14827 1237 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 EEF1B2P24534 225 aaKnown RBP13.08□□□□□ -0.32
SMG6-201ENST00000263073 CHRNDQ07001 517 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
SMG6-201ENST00000263073 KIF24Q5T7B8 1368 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 MMP1P03956 469 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 KRT1P04264 644 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 KRT3P12035 628 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 ACTN1P12814 892 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
SMG6-201ENST00000263073 TBCKQ8TEA7 893 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 HVCN1Q96D96 273 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 TADA3O75528 432 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 LMNB1P20700 586 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 MAGEA9P43362 315 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 UBE2SQ16763 222 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 ZMYM1Q5SVZ6 1142 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 RETREG2Q8NC44 543 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 PPP1R16BQ96T49 567 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 RCOR1Q9UKL0 485 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
SMG6-201ENST00000263073 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 GPC4O75487 556 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 PALMO75781 387 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 TMTC4Q5T4D3 741 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 KIAA0232Q92628 1395 aa13.08□□□□□ -0.32
SMG6-201ENST00000263073 MMEP08473 750 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 RSPH3Q86UC2 560 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
SMG6-201ENST00000263073 TEKT1Q969V4 418 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
SMG6-201ENST00000263073 EXOC1LA0A1B0GW35 172 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 FMO2Q99518 471 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 F5H423 210 aaPredicted RBP13.07□□□□□ -0.32
SMG6-201ENST00000263073 PLCG1P19174 1290 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
SMG6-201ENST00000263073 DMP1Q13316 513 aaPredicted RBP13.07□□□□□ -0.32
SMG6-201ENST00000263073 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 SLFN12Q8IYM2 578 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
SMG6-201ENST00000263073 RWDD2AQ9UIY3 292 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GOLGA8MH3BSY2 632 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 MFAP3LO75121 409 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 LRRC14Q15048 493 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 MAN2A1Q16706 1144 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GRAMD1BQ3KR37 738 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 FAM186BQ8IYM0 893 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 PIGSQ96S52 555 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 FGGP02679 453 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 POLR2MP0CAP2 368 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 TSC22D3Q99576 134 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 ABCF3Q9NUQ8 709 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 SNX24Q9Y343 169 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
SMG6-201ENST00000263073 GNGT2O14610 69 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 DDAH1O94760 285 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 DDIT3P35638 169 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 HSPA2P54652 639 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 PPP2R5EQ16537 467 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 LRRC23Q53EV4 343 aaPredicted RBP13.06□□□□□ -0.32
SMG6-201ENST00000263073 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 PPFIA2O75334 1257 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 TNNC2P02585 160 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 ATICP31939 592 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 ICE2Q659A1 982 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 TRIM56Q9BRZ2 755 aaKnown RBP13.06□□□□□ -0.32
SMG6-201ENST00000263073 MAGI2Q86UL8 1455 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 LOC102724159A0A0B4J2E5 919 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms