RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 MAGEF1Q9HAY2 307 aa19.83■□□□□ 0.77
TRAF4-201ENST00000262395 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
TRAF4-201ENST00000262395 LCA5LO95447 670 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 HPDP32754 393 aaPredicted RBP19.83■□□□□ 0.76
TRAF4-201ENST00000262395 RAPGEF1Q13905 1077 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 ASTE1Q2TB18 679 aaPredicted RBP19.83■□□□□ 0.76
TRAF4-201ENST00000262395 LRRC55Q6ZSA7 311 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 UNC13DQ70J99 1090 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 IFT20Q8IY31 132 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 SNX29Q8TEQ0 813 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 CASKIN2Q8WXE0 1202 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 CAPN7Q9Y6W3 813 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 MYH1P12882 1939 aa19.83■□□□□ 0.76
TRAF4-201ENST00000262395 MYO1FO00160 1098 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 GALNT17Q6IS24 598 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 MMS22LQ6ZRQ5 1243 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 MAATS1Q7Z4T9 603 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 REXO1Q8N1G1 1221 aaKnown RBP19.82■□□□□ 0.76
TRAF4-201ENST00000262395 YY1AP1Q9H869 796 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 GEMIN8Q9NWZ8 242 aaKnown RBP19.82■□□□□ 0.76
TRAF4-201ENST00000262395 SEC63Q9UGP8 760 aaKnown RBP19.82■□□□□ 0.76
TRAF4-201ENST00000262395 ADAMTS1Q9UHI8 967 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
TRAF4-201ENST00000262395 CPP00450 1065 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 EIF6P56537 245 aaKnown RBP19.82■□□□□ 0.76
TRAF4-201ENST00000262395 ITIH3Q06033 890 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 ECM1Q16610 540 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 CAVIN3Q969G5 261 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 LDHBP07195 334 aaKnown RBP19.82■□□□□ 0.76
TRAF4-201ENST00000262395 FAM83BQ5T0W9 1011 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 OR2W6PQ8NHA6 318 aa19.82■□□□□ 0.76
TRAF4-201ENST00000262395 KIAA0753Q2KHM9 967 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 SFMBT2Q5VUG0 894 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 FAM133AQ8N9E0 248 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 PIK3R5Q8WYR1 880 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 A0A087X0T9 212 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 USP17L5A8MUK1 530 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 NOL4O94818 638 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 FAM228BP0C875 321 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 GUCY2CP25092 1073 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 GNA11P29992 359 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 HNRNPH1P31943 449 aaKnown RBP19.81■□□□□ 0.76
TRAF4-201ENST00000262395 MNAT1P51948 309 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 HLTFQ14527 1009 aaKnown RBP eCLIP19.81■□□□□ 0.76
TRAF4-201ENST00000262395 SLC9C1Q4G0N8 1177 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 DDX42Q86XP3 938 aaKnown RBP eCLIP19.81■□□□□ 0.763e-8■■■□□ 16.5
TRAF4-201ENST00000262395 GUF1Q8N442 669 aaKnown RBP19.81■□□□□ 0.76
TRAF4-201ENST00000262395 EYA3Q99504 573 aa19.81■□□□□ 0.76
TRAF4-201ENST00000262395 SRP68Q9UHB9 627 aaKnown RBP19.81■□□□□ 0.76
TRAF4-201ENST00000262395 ABCA3Q99758 1704 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 NPHP3-ACAD11A0A0J9YXS1 232 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 PJA2O43164 708 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 CLEC10AQ8IUN9 316 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 IQCKQ8N0W5 287 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 H0YHG0 523 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 RAD51CO43502 376 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 EPB41P11171 864 aaKnown RBP19.8■□□□□ 0.76
TRAF4-201ENST00000262395 LSP1P33241 339 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 TNNI2P48788 182 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 DDB1Q16531 1140 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 RNF187Q5TA31 235 aaPredicted RBP19.8■□□□□ 0.76
TRAF4-201ENST00000262395 KCNV1Q6PIU1 500 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 ZHX3Q9H4I2 956 aa19.8■□□□□ 0.76
TRAF4-201ENST00000262395 SKOR1P84550 965 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 UBE2SQ16763 222 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 CEP85LQ5SZL2 805 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 OTUD6BQ8N6M0 293 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 ANKS1AQ92625 1134 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 GDF3Q9NR23 364 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 ANKIB1Q9P2G1 1089 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 KIAA1551Q9HCM1 1747 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 BACH1O14867 736 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 PPP1R2P41236 205 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 PAK2Q13177 524 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 TEX2Q8IWB9 1127 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 RAD54LQ92698 747 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 TSG101Q99816 390 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 NR1D1P20393 614 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 MARCH10Q8NA82 808 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-201ENST00000262395 CEP95Q96GE4 821 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 PLAAQ9Y263 795 aa19.79■□□□□ 0.76
TRAF4-201ENST00000262395 XIRP1Q702N8 1843 aaKnown RBP19.78■□□□□ 0.76
TRAF4-201ENST00000262395 SCN7AQ01118 1682 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 KIAA0754O94854 1291 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 CDK8P49336 464 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 MYOCDQ8IZQ8 938 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 MTMR9Q96QG7 549 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 AP1M1Q9BXS5 423 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 PPANQ9NQ55 473 aaKnown RBP19.78■□□□□ 0.76
TRAF4-201ENST00000262395 BCCIPQ9P287 314 aaKnown RBP eCLIP19.78■□□□□ 0.76
TRAF4-201ENST00000262395 COL4A3BPQ9Y5P4 624 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 KCNK3O14649 394 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 EDIL3O43854 480 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 MARCH6O60337 910 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 FGFR1OPO95684 399 aaKnown RBP19.78■□□□□ 0.76
TRAF4-201ENST00000262395 ACTN1P12814 892 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 KRT79Q5XKE5 535 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 LAMB1P07942 1786 aa19.78■□□□□ 0.76
TRAF4-201ENST00000262395 DOT1LQ8TEK3 1739 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms