RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 THAP12O43422 761 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 CCDC62Q6P9F0 684 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 BICD1Q96G01 975 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 RAB21Q9UL25 225 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 GNPATO15228 680 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 CIB2O75838 187 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
SREBF1-201ENST00000261646 ALKBH5Q6P6C2 394 aaKnown RBP17.69■□□□□ 0.42
SREBF1-201ENST00000261646 NT5C3AQ9H0P0 336 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 MAP2K7O14733 419 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 NR2F2P24468 414 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 ARL8AQ96BM9 186 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 PSMD1Q99460 953 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 FAM167BQ9BTA0 163 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 AK8Q96MA6 479 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 LZTS2Q9BRK4 669 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 DMGDHQ9UI17 866 aaKnown RBP17.69■□□□□ 0.42
SREBF1-201ENST00000261646 CDHR2Q9BYE9 1310 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 TULP2O00295 520 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 RASGRF2O14827 1237 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 KRT5P13647 590 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 MYCT1Q8N699 235 aa17.69■□□□□ 0.42
SREBF1-201ENST00000261646 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-201ENST00000261646 DPYDQ12882 1025 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 CLUL1Q15846 466 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 TMC4Q7Z404 712 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 GJA10Q969M2 543 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 RNPC3Q96LT9 517 aaKnown RBP17.68■□□□□ 0.42
SREBF1-201ENST00000261646 ZMYND12Q9H0C1 365 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 EIF3BP55884 814 aaKnown RBP17.68■□□□□ 0.42
SREBF1-201ENST00000261646 MAEAQ7L5Y9 396 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 ILDR1Q86SU0 546 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-201ENST00000261646 VPS37BQ9H9H4 285 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 RBM12Q9NTZ6 932 aaKnown RBP17.68■□□□□ 0.42
SREBF1-201ENST00000261646 BZW2Q9Y6E2 419 aaKnown RBP17.68■□□□□ 0.42
SREBF1-201ENST00000261646 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 ADCY8P40145 1251 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 EHD2Q9NZN4 543 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 SNX24Q9Y343 169 aa17.68■□□□□ 0.42
SREBF1-201ENST00000261646 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 TXNDC9O14530 226 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 FGGP02679 453 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 OR2W6PQ8NHA6 318 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 GDAP1Q8TB36 358 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 RUNDC3BQ96NL0 473 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 TRIM4Q9C037 500 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-201ENST00000261646 TBK1Q9UHD2 729 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 DUSP10Q9Y6W6 482 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 POLE2P56282 527 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 MESDQ14696 234 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 RABL6Q3YEC7 729 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-201ENST00000261646 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 USP37Q86T82 979 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 IGDCC4Q8TDY8 1250 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 FBXL5Q9UKA1 691 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 LAD1O00515 517 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 BCRP11274 1271 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 CD44P16070 742 aaKnown RBP17.67■□□□□ 0.42
SREBF1-201ENST00000261646 TMOD1P28289 359 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 SLC1A4P43007 532 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 CYP2J2P51589 502 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 EHD4Q9H223 541 aa17.67■□□□□ 0.42
SREBF1-201ENST00000261646 RFX5P48382 616 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-201ENST00000261646 HDLBPQ00341 1268 aaKnown RBP17.66■□□□□ 0.42
SREBF1-201ENST00000261646 KCNV2Q8TDN2 545 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 TBCKQ8TEA7 893 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 ZBTB21Q9ULJ3 1066 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 USTQ9Y2C2 406 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 PHF20L1A8MW92 1017 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 CCDC188H7C350 402 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 BIRC2Q13490 618 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 EHMT1Q9H9B1 1298 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 MLXIPLQ9NP71 852 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 KIAA1024Q9UPX6 916 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 ARMC2Q8NEN0 867 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 CHMP6Q96FZ7 201 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 SLC40A1Q9NP59 571 aa17.66■□□□□ 0.42
SREBF1-201ENST00000261646 TROVE2P10155 538 aaKnown RBP eCLIP17.65■□□□□ 0.424e-6■□□□□ 9.4
SREBF1-201ENST00000261646 DR1Q01658 176 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 PARP10Q53GL7 1025 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 ARHGAP24Q8N264 748 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 H0Y3Z8 333 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms