RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 NNTQ13423 1086 aa17.85■□□□□ 0.45
SNCAIP-202ENST00000261368 MYH3P11055 1940 aa17.85■□□□□ 0.45
SNCAIP-202ENST00000261368 LRP6O75581 1613 aa17.85■□□□□ 0.45
SNCAIP-202ENST00000261368 NUP98P52948 1817 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 DDX25Q9UHL0 483 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 ECM29Q5VYK3 1845 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 E9PMD0 336 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 ERLIN2O94905 339 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 ASIC2Q16515 512 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 GPBP1Q86WP2 473 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 COL4A3BPQ9Y5P4 624 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 MNAT1P51948 309 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 FKBP3Q00688 224 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 TSEN2Q8NCE0 465 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-202ENST00000261368 GOLGA8KD6RF30 607 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 PAK2Q13177 524 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 CEP85LQ5SZL2 805 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 KCTD1Q719H9 257 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 KCNK18Q7Z418 384 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 ZSCAN29Q8IWY8 852 aaPredicted RBP17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 TTYH3Q9C0H2 523 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 FAM169AQ9Y6X4 670 aa17.83■□□□□ 0.45
SNCAIP-202ENST00000261368 INPP5BP32019 993 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 CCDC65Q8IXS2 484 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 OTUD6BQ8N6M0 293 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 SALL4Q9UJQ4 1053 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 ADAM9Q13443 819 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 MMTAG2Q9BU76 263 aaKnown RBP17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 LRRC27Q9C0I9 530 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 FLT1P17948 1338 aa17.83■□□□□ 0.44
SNCAIP-202ENST00000261368 MYH13Q9UKX3 1938 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 UBR2Q8IWV8 1755 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 MEIS1O00470 390 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 AARSP49588 968 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 CENPPQ6IPU0 288 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 PDXDC1Q6P996 788 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 RAD54LQ92698 747 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 PPANQ9NQ55 473 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 STK17AQ9UEE5 414 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 DUOX1Q9NRD9 1551 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 COASYQ13057 564 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 GUF1Q8N442 669 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 AP1M1Q9BXS5 423 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 BLOC1S4Q9NUP1 217 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 AGPSO00116 658 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 PRPF6O94906 941 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 RPS6KA1Q15418 735 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 ADAT2Q7Z6V5 191 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 ZIM3Q96PE6 472 aa17.82■□□□□ 0.44
SNCAIP-202ENST00000261368 KLRC1P26715 233 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 HAUS3Q68CZ6 603 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 TTBK2Q6IQ55 1244 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 TRMT1LQ7Z2T5 733 aaKnown RBP17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 PACS2Q86VP3 889 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 UBLCP1Q8WVY7 318 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 GOPCQ9HD26 462 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 GUCY1A3Q02108 690 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 LRRC63Q05C16 580 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 NAA35Q5VZE5 725 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 MMGT1Q8N4V1 131 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 SPZ1Q9BXG8 430 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 PACSIN1Q9BY11 444 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 CETN3O15182 167 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 GLI1P08151 1106 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 TNNC1P63316 161 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 GTF2IP78347 998 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 PTF1AQ7RTS3 328 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 PNMA5Q96PV4 448 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
SNCAIP-202ENST00000261368 ACTN1P12814 892 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 CORO7P57737 925 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 EMBQ6PCB8 327 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 TADA2BQ86TJ2 420 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 DAGLBQ8NCG7 672 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 TLR10Q9BXR5 811 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 A0A1W2PQJ5 194 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 POTEB3A0JP26 581 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 POTECB2RU33 542 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L15C9J2P7 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L13C9JLJ4 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L11C9JVI0 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L18D6R9N7 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L22D6RA61 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L17D6RBQ6 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L19D6RCP7 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L20D6RJB6 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 FAM153BP0C7A2 387 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 STAT3P40763 770 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 MRPL12P52815 198 aaKnown RBP17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 CYP4A11Q02928 519 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L24Q0WX57 530 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 FAM153CQ494X1 144 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 USP17L6PQ6QN14 398 aa17.8■□□□□ 0.44
SNCAIP-202ENST00000261368 POTEBQ6S5H4 581 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms