RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TP53BP1Q12888 1972 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 MTF1Q14872 753 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 C15orf39Q6ZRI6 1047 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF784Q8NCA9 323 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 REC8O95072 547 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 VNN2O95498 520 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF865P0CJ78 1059 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 SMARCA1P28370 1054 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 INF2Q27J81 1249 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 RAI14Q9P0K7 980 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 SYCE3A1L190 88 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 TRNP1Q6NT89 227 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 DPF3Q92784 378 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 ZC3H12CQ9C0D7 883 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 PTPRHQ9HD43 1115 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 ACP6Q9NPH0 428 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 DIAPH3Q9NSV4 1193 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 PPP1R9AQ9ULJ8 1098 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 RBM47A0AV96 593 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 DLG4P78352 724 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 TRIM71Q2Q1W2 868 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF710Q8N1W2 664 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 NAA15Q9BXJ9 866 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 CCDC113Q9H0I3 377 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 PPP1R18Q6NYC8 613 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 CCDC60Q8IWA6 550 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 SCFD1Q8WVM8 642 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 SLC5A5Q92911 643 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 IFT122Q9HBG6 1241 aa6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 CIZ1Q9ULV3 898 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-201ENST00000260810 RPS6P62753 249 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 TMEM67Q5HYA8 995 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 LIMS2Q7Z4I7 341 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 RIC8AQ9NPQ8 531 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 TCRBV5S1A1TA0A578 114 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 UBXN2AP68543 259 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 IHHQ14623 411 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 PGM5Q15124 567 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 ADALQ6DHV7 355 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 SYMPKQ92797 1274 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 AOC2O75106 756 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 OLFML2BQ68BL8 750 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF804AQ7Z570 1209 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 PAGE5Q96GU1 130 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 RNPEPQ9H4A4 650 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 SPON1Q9HCB6 807 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 RNF186Q9NXI6 227 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 IGSF9BQ9UPX0 1349 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 HMGCS2P54868 508 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 KARSQ15046 597 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 MFSD6Q6ZSS7 791 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 BHLHA9Q7RTU4 235 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 UBR7Q8N806 425 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 TBCKQ8TEA7 893 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 SAMSN1Q9NSI8 373 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 HDAC5Q9UQL6 1122 aa6.53□□□□□ -1.36
TOPBP1-201ENST00000260810 DDAH1O94760 285 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CHRM1P11229 460 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CDK11BP21127 795 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CIAPIN1Q6FI81 312 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 PPP4R3AQ6IN85 833 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ARRDC4Q8NCT1 418 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 BAP1Q92560 729 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 IRX2Q9BZI1 471 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 NAPBQ9H115 298 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CABP5Q9NP86 173 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 PLAGL2Q9UPG8 496 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CYP11B2P19099 503 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 MCTP1Q6DN14 999 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 TRIM47Q96LD4 638 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CHMP5Q9NZZ3 219 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 MAN1B1Q9UKM7 699 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 SIK3Q9Y2K2 1263 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ZBTB5O15062 677 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 PGK2P07205 417 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 RTN4RL1Q86UN2 441 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 EFCC1Q9HA90 598 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CBX8Q9HC52 389 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 GPRC5CQ9NQ84 441 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 HCSTQ9UBK5 93 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 TTLL1O95922 423 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ANP32AP39687 249 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ARHGAP25P42331 645 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CLDN10P78369 228 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ABHD15Q6UXT9 468 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 TRIM50Q86XT4 487 aa6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 CACTINQ8WUQ7 758 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ORC3Q9UBD5 711 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 ANK3Q12955 4377 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-201ENST00000260810 NCANO14594 1321 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ZBTB43O43298 467 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CASP4P49662 377 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 FXR1P51114 621 aaKnown RBP eCLIP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ARHGAP1Q07960 439 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ANO1Q5XXA6 986 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 UNC45AQ9H3U1 944 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 RRAGCQ9HB90 399 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms