RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 JAK2O60674 1132 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 MCM2P49736 904 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 ACLYP53396 1101 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 GALNT17Q6IS24 598 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 FERMT2Q96AC1 680 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 LLPHQ9BRT6 129 aaKnown RBP19.13■□□□□ 0.65
SDCBP-201ENST00000260130 ALG1Q9BT22 464 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 CD2BP2O95400 341 aaKnown RBP19.13■□□□□ 0.65
SDCBP-201ENST00000260130 GH1P01241 217 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 ASGR1P07306 291 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 ICAM3P32942 547 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 SREBF1P36956 1147 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 NLRX1Q86UT6 975 aa19.13■□□□□ 0.65
SDCBP-201ENST00000260130 SPATA31C2B4DYI2 1134 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 ZEB2O60315 1214 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 RASGRP4Q8TDF6 673 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 KCNJ14Q9UNX9 436 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 DNAH12Q6ZR08 3092 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 FIBPO43427 364 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 PTMSP20962 102 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 CPT1AP50416 773 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 ARHGAP1Q07960 439 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 BLIDQ8IZY5 108 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 DAGLBQ8NCG7 672 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 DPF3Q92784 378 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 PHF20Q9BVI0 1012 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 UBIAD1Q9Y5Z9 338 aa19.12■□□□□ 0.65
SDCBP-201ENST00000260130 A0A1W2PQ45 241 aaPredicted RBP19.11■□□□□ 0.65
SDCBP-201ENST00000260130 A0A1W2PQY0 241 aa19.11■□□□□ 0.65
SDCBP-201ENST00000260130 ITGB5P18084 799 aa19.11■□□□□ 0.65
SDCBP-201ENST00000260130 ARHGAP4P98171 946 aa19.11■□□□□ 0.65
SDCBP-201ENST00000260130 SP2Q02086 613 aa19.11■□□□□ 0.65
SDCBP-201ENST00000260130 BRDTQ58F21 947 aaPredicted RBP19.11■□□□□ 0.65
SDCBP-201ENST00000260130 DHX37Q8IY37 1157 aaKnown RBP19.11■□□□□ 0.65
SDCBP-201ENST00000260130 GPRASP2Q96D09 838 aa19.11■□□□□ 0.65
SDCBP-201ENST00000260130 GJB4Q9NTQ9 266 aa19.11■□□□□ 0.65
SDCBP-201ENST00000260130 A6NJR5 290 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 ATN1P54259 1190 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-201ENST00000260130 SEMA3FQ13275 785 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 LAMC2Q13753 1193 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 NPY5RQ15761 445 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 EMID1Q96A84 441 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-201ENST00000260130 TMX3Q96JJ7 454 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 GLT1D1Q96MS3 346 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 GBP4Q96PP9 640 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 JADE2Q9NQC1 790 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 MAFGO15525 162 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 UBA1P22314 1058 aaKnown RBP19.1■□□□□ 0.65
SDCBP-201ENST00000260130 SLC39A5Q6ZMH5 540 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 CRYGNQ8WXF5 182 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 CDHR1Q96JP9 859 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 MXRA8Q9BRK3 442 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 KIAA1217Q5T5P2 1943 aa19.1■□□□□ 0.65
SDCBP-201ENST00000260130 M0R2N6 131 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 XRCC6P12956 609 aaKnown RBP eCLIP19.09■□□□□ 0.65
SDCBP-201ENST00000260130 LRRC26Q2I0M4 334 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 CELF3Q5SZQ8 465 aaKnown RBP19.09■□□□□ 0.65
SDCBP-201ENST00000260130 MYSM1Q5VVJ2 828 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 CXCL17Q6UXB2 119 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 AFG1LQ8WV93 481 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-201ENST00000260130 STARD7Q9NQZ5 370 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 GGPS1O95749 300 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 CYP3A4P08684 503 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 ZNF76P36508 570 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 HMGN5P82970 282 aaKnown RBP19.09■□□□□ 0.65
SDCBP-201ENST00000260130 MTMR1Q13613 665 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 NEDD9Q14511 834 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 CEP55Q53EZ4 464 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 VTI1AQ96AJ9 217 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 SENP7Q9BQF6 1050 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 MLXIPQ9HAP2 919 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 POLR3EQ9NVU0 708 aa19.09■□□□□ 0.65
SDCBP-201ENST00000260130 ELP1O95163 1332 aa19.08■□□□□ 0.65
SDCBP-201ENST00000260130 EVI5O60447 810 aa19.08■□□□□ 0.65
SDCBP-201ENST00000260130 CABYRO75952 493 aa19.08■□□□□ 0.65
SDCBP-201ENST00000260130 HSP90AA1P07900 732 aaKnown RBP19.08■□□□□ 0.65
SDCBP-201ENST00000260130 CYP2W1Q8TAV3 490 aa19.08■□□□□ 0.65
SDCBP-201ENST00000260130 K7ELQ4 463 aaPredicted RBP19.08■□□□□ 0.64
SDCBP-201ENST00000260130 KPNA6O60684 536 aa19.08■□□□□ 0.64
SDCBP-201ENST00000260130 MRE11P49959 708 aa19.08■□□□□ 0.64
SDCBP-201ENST00000260130 C1orf53Q5VUE5 145 aa19.08■□□□□ 0.64
SDCBP-201ENST00000260130 BCAS3Q9H6U6 928 aa19.08■□□□□ 0.64
SDCBP-201ENST00000260130 MEIS1O00470 390 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 SORBS3O60504 671 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 MYL3P08590 195 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 TRIM29Q14134 588 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 SNX17Q15036 470 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 GIMAP8Q8ND71 665 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-201ENST00000260130 PPTC7Q8NI37 304 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 TNPO1Q92973 898 aaKnown RBP19.07■□□□□ 0.64
SDCBP-201ENST00000260130 SPATA33Q96N06 139 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 KCNH7Q9NS40 1196 aa19.07■□□□□ 0.64
SDCBP-201ENST00000260130 ATP9AO75110 1047 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 MMP3P08254 477 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 PURAQ00577 322 aaKnown RBP19.06■□□□□ 0.64
SDCBP-201ENST00000260130 SKOR2Q2VWA4 1001 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-201ENST00000260130 HSDL1Q3SXM5 330 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 CYFIP1Q7L576 1253 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 NIPA1Q7RTP0 329 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms