RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 PLEKHA4Q9H4M7 779 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PCDHA4Q9UN74 947 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ATP8A1Q9Y2Q0 1164 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 USP32Q8NFA0 1604 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 IQANK1A0A1B0GTG1 560 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 F8W8V4 182 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 HEXIM1O94992 359 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 DLATP10515 647 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 HSPD1P10809 573 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MCF2P10911 925 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ATP2B4P23634 1241 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PSMC2P35998 433 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PIP4K2CQ8TBX8 421 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 NHEJ1Q9H9Q4 299 aaPredicted RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MRPL47Q9HD33 250 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 NOP53Q9NZM5 478 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MID2Q9UJV3 735 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PCDHA13Q9Y5I0 950 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 CLIC4Q9Y696 253 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 KIF1AQ12756 1690 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SEMA3EO15041 775 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 GSPT1P15170 499 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MMS22LQ6ZRQ5 1243 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ZC3H18Q86VM9 953 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 RFX6Q8HWS3 928 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 CRLF3Q8IUI8 442 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ADPGKQ9BRR6 497 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TEKT3Q9BXF9 490 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ZNF148Q9UQR1 794 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 H7C0C1 242 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 EEF1B2P24534 225 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 CASP2P42575 452 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ATP5OP48047 213 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ADAT2Q7Z6V5 191 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PCGF5Q86SE9 256 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 LARP4BQ92615 738 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 UPF3AQ9H1J1 476 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 NCAPD2Q15021 1401 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 GNGT2O14610 69 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 CFBP00751 764 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PPARDQ03181 441 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SLC39A14Q15043 492 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SSH3Q8TE77 659 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SLC39A2Q9NP94 309 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 DISC1Q9NRI5 854 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 HESX1Q9UBX0 185 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TEKT2Q9UIF3 430 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PREX1Q8TCU6 1659 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MYO1FO00160 1098 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SPAG7O75391 227 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PNMA6AP0CW24 399 aaPredicted RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PDE6AP16499 860 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TFDP1Q14186 410 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 FBXO18Q8NFZ0 1043 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 USP28Q96RU2 1077 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SH3GLB2Q9NR46 395 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 WDR17Q8IZU2 1322 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 POC1B-GALNT4F8VUJ3 575 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 GCFC2P16383 781 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TMOD1P28289 359 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ALDH1B1P30837 517 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 VPS41P49754 854 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 DYNC1I2Q13409 638 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 KRT24Q2M2I5 525 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SKA2Q8WVK7 121 aaPredicted RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 KLHL29Q96CT2 875 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 C8orf37Q96NL8 207 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 RNF26Q9BY78 433 aaPredicted RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TFCP2L1Q9NZI6 479 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 IFT172Q9UG01 1749 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 M0R2C6 588 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 KRT80Q6KB66 452 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 NBPF10Q6P3W6 841 aaKnown RBP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 TTLL7Q6ZT98 887 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 PPM1KQ8N3J5 372 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 GDAP1Q8TB36 358 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 KLHDC4Q8TBB5 520 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 CFAP36Q96G28 342 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 CCDC138Q96M89 665 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 MMS19Q96T76 1030 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 YY1AP1Q9H869 796 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 AS3MTQ9HBK9 375 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 MAN1B1Q9UKM7 699 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 FRMPD2Q68DX3 1309 aaPredicted RBP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 ADGRL3Q9HAR2 1447 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 YEATS2Q9ULM3 1422 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 hCG_1642624A0A1W2PR95 340 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 CREB3O43889 395 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 NR2F2P24468 414 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 CLCN6P51797 869 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 PDE1BQ01064 536 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 CDR2Q01850 454 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 SF3A3Q12874 501 aaKnown RBP eCLIP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 DPP8Q6V1X1 898 aaPredicted RBP5.18□□□□□ -1.58
RC3H1-201ENST00000258349 NEK9Q8TD19 979 aa5.18□□□□□ -1.58
RC3H1-201ENST00000258349 P2RX5Q93086 422 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms