RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 NOX5Q96PH1 765 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
MSI1-201ENST00000257552 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 ITGB3BPQ13352 177 aaPredicted RBP16.28■□□□□ 0.2
MSI1-201ENST00000257552 CCDC155Q8N6L0 562 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
MSI1-201ENST00000257552 RUBCNQ92622 972 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 GOLGA6L10A6NI86 522 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 CDK17Q00537 523 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 QPCTQ16769 361 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 ODF2Q5BJF6 829 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.2
MSI1-201ENST00000257552 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
MSI1-201ENST00000257552 DNM1LO00429 736 aa16.27■□□□□ 0.19
MSI1-201ENST00000257552 KIF1CO43896 1103 aaKnown RBP16.27■□□□□ 0.19
MSI1-201ENST00000257552 TRIM37O94972 964 aa16.27■□□□□ 0.19
MSI1-201ENST00000257552 TRAPPC10P48553 1259 aa16.27■□□□□ 0.19
MSI1-201ENST00000257552 GRIK5Q16478 980 aa16.27■□□□□ 0.19
MSI1-201ENST00000257552 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.19
MSI1-201ENST00000257552 NLRC4Q9NPP4 1024 aa16.27■□□□□ 0.19
MSI1-201ENST00000257552 DDX20Q9UHI6 824 aaKnown RBP16.27■□□□□ 0.19
MSI1-201ENST00000257552 PALMO75781 387 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 EHHADHQ08426 723 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 SNCBQ16143 134 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 INF2Q27J81 1249 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 ARL6IP4Q66PJ3 421 aaKnown RBP16.26■□□□□ 0.19
MSI1-201ENST00000257552 CYB5D1Q6P9G0 228 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 FAM114A1Q8IWE2 563 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 PARP9Q8IXQ6 854 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 OSBPL7Q9BZF2 842 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 BICDL2A1A5D9 508 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 CLGNO14967 610 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 PLCG1P19174 1290 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 TNFRSF8P28908 595 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 GLE1Q53GS7 698 aaKnown RBP16.26■□□□□ 0.19
MSI1-201ENST00000257552 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
MSI1-201ENST00000257552 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 NDST4Q9H3R1 872 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 KBTBD4Q9NVX7 518 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 A0A1W2PQJ5 194 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 OPLAHO14841 1288 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 RPSAP08865 295 aaKnown RBP16.26■□□□□ 0.19
MSI1-201ENST00000257552 ARID5AQ03989 594 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
MSI1-201ENST00000257552 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
MSI1-201ENST00000257552 CCDC194A0A1B0GVG4 234 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 HMGB1P1B2RPK0 211 aaPredicted RBP16.25■□□□□ 0.19
MSI1-201ENST00000257552 RAD51CO43502 376 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 C6orf89Q6UWU4 347 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 RPAINQ86UA6 219 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 FUKQ8N0W3 1084 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 GMNCA6NCL1 334 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 VWA3BQ502W6 1294 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 FAM228AQ86W67 206 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 MIEF2Q96C03 454 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
MSI1-201ENST00000257552 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
MSI1-201ENST00000257552 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 MYZAPP0CAP1 466 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
MSI1-201ENST00000257552 PAGR1Q9BTK6 254 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 TPX2Q9ULW0 747 aaKnown RBP16.24■□□□□ 0.19
MSI1-201ENST00000257552 SIK3Q9Y2K2 1263 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 C21orf2O43822 256 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
MSI1-201ENST00000257552 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
MSI1-201ENST00000257552 TRIM9Q9C026 710 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 TMBIM4Q9HC24 238 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
MSI1-201ENST00000257552 COL5A3P25940 1745 aaPredicted RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 PPP1R12BO60237 982 aaPredicted RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 CALM1P0DP23 149 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 CALM2P0DP24 149 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 CALM3P0DP25 149 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 PAX7P23759 505 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 ANKRD2Q9GZV1 360 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 PHF20L1A8MW92 1017 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 HNRNPH3P31942 346 aaKnown RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 HSD17B3P37058 310 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 PPP2R5AQ15172 486 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 PRR5LQ6MZQ0 368 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 CD302Q8IX05 232 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
MSI1-201ENST00000257552 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 LEMD3Q9Y2U8 911 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 MYH10P35580 1976 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 CTNNA1P35221 906 aaKnown RBP16.23■□□□□ 0.19
MSI1-201ENST00000257552 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 CABP7Q86V35 215 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 TBC1D31Q96DN5 1066 aa16.23■□□□□ 0.19
MSI1-201ENST00000257552 DYNLL2Q96FJ2 89 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms