RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 EPN3Q9H201 632 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 KAT14Q9H8E8 782 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 CAMSAP1Q5T5Y3 1602 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 KRT3P12035 628 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 PDIA5Q14554 519 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 MIS18BP1Q6P0N0 1132 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 HPS3Q969F9 1004 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 SEC63Q9UGP8 760 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 GMNCA6NCL1 334 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 TTI1O43156 1089 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 MX2P20592 715 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 TWF2Q6IBS0 349 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 C1orf228Q6PIY5 440 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 CYP26C1Q6V0L0 522 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 UBL4BQ8N7F7 174 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 LENG1Q96BZ8 264 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 RMDN1Q96DB5 314 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 TRPC7Q9HCX4 862 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 COMMD8Q9NX08 183 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 TMOD3Q9NYL9 352 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 KLHL42Q9P2K6 505 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 FAM135BQ49AJ0 1406 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 EPB41P11171 864 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 GNL1P36915 607 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ZBED6P86452 979 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 KRT71Q3SY84 523 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 FSIP1Q8NA03 581 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ZNF473Q8WTR7 871 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 KCNB2Q92953 911 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 PLIN2Q99541 437 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 PARVGQ9HBI0 331 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 GUCA1BQ9UMX6 200 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 E9PCH4 1651 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 F8W810 466 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 HNRNPRO43390 633 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ATP6V1G2O95670 118 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 CYTH1Q15438 398 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ATP8B4Q8TF62 1192 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 THAP11Q96EK4 314 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 USP28Q96RU2 1077 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 GGA2Q9UJY4 613 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 PPP2R2CQ9Y2T4 447 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 MADDQ8WXG6 1647 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 PIK3R4Q99570 1358 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ZC3H13Q5T200 1668 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 CAPN15O75808 1086 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 ACTN1P12814 892 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 EPHB4P54760 987 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 ARHGEF6Q15052 776 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TBC1D9Q6ZT07 1266 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TERB1Q8NA31 727 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TTLL11Q8NHH1 800 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 NUDCD1Q96RS6 583 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TRIM55Q9BYV6 548 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 SFMBT1Q9UHJ3 866 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 IQANK1A0A1B0GTG1 560 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 HGSO14964 777 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 STRNO43815 780 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 HMOX2P30519 316 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 RNASELQ05823 741 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 DQX1Q8TE96 717 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 DNAJC17Q9NVM6 304 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 DIP2CQ9Y2E4 1556 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TBC1D8O95759 1140 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 STARD3NLO95772 234 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 MYBL1P10243 752 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 MYL6BP14649 208 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 MSH2P43246 934 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 AKAP4Q5JQC9 854 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 METTL24Q5JXM2 366 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 RABGEF1Q9UJ41 708 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 EXOC7Q9UPT5 735 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 ZBTB1Q9Y2K1 713 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 IVNS1ABPQ9Y6Y0 642 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 LAMC1P11047 1609 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TMEM247A6NEH6 219 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 SPDYE3A6NKU9 549 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TAF4O00268 1085 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 BIRC5O15392 142 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 CEP55Q53EZ4 464 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 LARP1Q6PKG0 1096 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 CDH24Q86UP0 819 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 VPS37DQ86XT2 251 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 MAB21L3Q8N8X9 362 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 QKIQ96PU8 341 aaKnown RBP eCLIP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 ZCWPW1Q9H0M4 648 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 OLFML3Q9NRN5 406 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 FKBP14Q9NWM8 211 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TBC1D7Q9P0N9 293 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TEKT2Q9UIF3 430 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 GPC6Q9Y625 555 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 ANKRD33BA6NCL7 494 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 BAIAP3O94812 1187 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 GUCY2DQ02846 1103 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 NONOQ15233 471 aaKnown RBP eCLIP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 CRELD2Q6UXH1 353 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 OR8K1Q8NGG5 319 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms