RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 EPSTI1Q96J88 318 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 WDR11Q9BZH6 1224 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 KIAA1217Q5T5P2 1943 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 DDX39AO00148 427 aaKnown RBP13.69□□□□□ -0.22
NIP7-201ENST00000254940 FKTNO75072 461 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 ADCY5O95622 1261 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 ALDH5A1P51649 535 aaPredicted RBP13.69□□□□□ -0.22
NIP7-201ENST00000254940 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
NIP7-201ENST00000254940 GRB14Q14449 540 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 SASS6Q6UVJ0 657 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 PDCD2LQ9BRP1 358 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 TRIM17Q9Y577 477 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 NR3C2P08235 984 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
NIP7-201ENST00000254940 TMEM60Q9H2L4 133 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
NIP7-201ENST00000254940 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 PP2D1A8MPX8 630 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 PFASO15067 1338 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 TRAF1Q13077 416 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 KIF22Q14807 665 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 MORN1Q5T089 497 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 CSRNP2Q9H175 543 aa13.68□□□□□ -0.22
NIP7-201ENST00000254940 DNAJC25-GNG10A0A024R161 153 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 ARP10275 920 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 ITGB5P18084 799 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 CMA1P23946 247 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 ZNF165P49910 485 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 PDE4DQ08499 809 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 MAP2K5Q13163 448 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
NIP7-201ENST00000254940 STAMQ92783 540 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
NIP7-201ENST00000254940 SYKP43405 635 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
NIP7-201ENST00000254940 PNOCQ13519 176 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 ZNF792Q3KQV3 632 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 ARMCX2Q7L311 632 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
NIP7-201ENST00000254940 FAM200AQ8TCP9 573 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
NIP7-201ENST00000254940 SLC15A5A6NIM6 579 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 RGS20O76081 388 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 SREBF1P36956 1147 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 PTGDRQ13258 359 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 DPCR1Q3MIW9 517 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 SPC24Q8NBT2 197 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 COPS5Q92905 334 aa13.66□□□□□ -0.22
NIP7-201ENST00000254940 PPP6R2O75170 966 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
NIP7-201ENST00000254940 AP3B2Q13367 1082 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 TRIB2Q92519 343 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.65□□□□□ -0.22
NIP7-201ENST00000254940 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
NIP7-201ENST00000254940 DDX25Q9UHL0 483 aaKnown RBP13.65□□□□□ -0.22
NIP7-201ENST00000254940 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
NIP7-201ENST00000254940 RPTORQ8N122 1335 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 ESPNB1AK53 854 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 CHMP2AO43633 222 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 STRNO43815 780 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 ATP9AO75110 1047 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 KRI1Q8N9T8 703 aaKnown RBP13.65□□□□□ -0.22
NIP7-201ENST00000254940 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 PLIN2Q99541 437 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 HPSEQ9Y251 543 aa13.65□□□□□ -0.22
NIP7-201ENST00000254940 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.64□□□□□ -0.23
NIP7-201ENST00000254940 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
NIP7-201ENST00000254940 MARCH6O60337 910 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 SNAI1O95863 264 aaPredicted RBP13.64□□□□□ -0.23
NIP7-201ENST00000254940 FOSP01100 380 aaPredicted RBP13.64□□□□□ -0.23
NIP7-201ENST00000254940 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
NIP7-201ENST00000254940 CCND2P30279 289 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 COPB2P35606 906 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 RGS2P41220 211 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 TXKP42681 527 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 ZRSR1Q15695 479 aaKnown RBP13.64□□□□□ -0.23
NIP7-201ENST00000254940 LY6KQ17RY6 165 aa13.64□□□□□ -0.23
NIP7-201ENST00000254940 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms