RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 MTG1Q9BT17 334 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 ZMYND12Q9H0C1 365 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 GLT8D2Q9H1C3 349 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 BCAS3Q9H6U6 928 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 VPS54Q9P1Q0 977 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 MYH6P13533 1939 aa20.58■□□□□ 0.88
SNRPA1-201ENST00000254193 ESYT2A0FGR8 921 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 KPNA6O60684 536 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 FOSP01100 380 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 MMP3P08254 477 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 ICAM3P32942 547 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 JAKMIP3Q5VZ66 844 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 TEX2Q8IWB9 1127 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 CCDC12Q8WUD4 166 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 PPP1R13LQ8WUF5 828 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 ANO3Q9BYT9 981 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 PRO3102Q9H379 93 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 C6orf50Q9HD87 102 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 TMEM39AQ9NV64 488 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 ALPK3Q96L96 1907 aa20.57■□□□□ 0.88
SNRPA1-201ENST00000254193 FIBPO43427 364 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 ITGB5P18084 799 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 CLK2P49760 499 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 ME3Q16798 604 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 NLRX1Q86UT6 975 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 NECAB1Q8N987 351 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 SPATA33Q96N06 139 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 LBHD1Q9BQE6 289 aaPredicted RBP20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 C22orf23Q9BZE7 217 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 MLXIPQ9HAP2 919 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 UBIAD1Q9Y5Z9 338 aa20.56■□□□□ 0.88
SNRPA1-201ENST00000254193 MROH7Q68CQ1 1323 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 LARGE1O95461 756 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 ITGB8P26012 769 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 CHMP4BP1P59074 171 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 FAM126BQ8IXS8 530 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 PPTC7Q8NI37 304 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 AIFM3Q96NN9 605 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 KIF2CQ99661 725 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 GTF3C3Q9Y5Q9 886 aa20.55■□□□□ 0.88
SNRPA1-201ENST00000254193 KIAA0355O15063 1070 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 DEXIO95424 95 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 GNA11P29992 359 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 DGKDQ16760 1214 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 NBPF20Q3BBV1 942 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 HSDL1Q3SXM5 330 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 HABP4Q5JVS0 413 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 CYFIP1Q7L576 1253 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 REXO1Q8N1G1 1221 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 CCDC148Q8NFR7 591 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 CYP2W1Q8TAV3 490 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 RASGRP4Q8TDF6 673 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 GPRASP2Q96D09 838 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 TRPV6Q9H1D0 765 aa20.54■□□□□ 0.88
SNRPA1-201ENST00000254193 ATP9AO75110 1047 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 CDKL5O76039 1030 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 CTDNEP1O95476 244 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 SREBF1P36956 1147 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 NEDD9Q14511 834 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 FAM47CQ5HY64 1035 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 KAT2BQ92831 832 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 BADQ92934 168 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 JADE2Q9NQC1 790 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 SH3GLB2Q9NR46 395 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 PKD2L1Q9P0L9 805 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 TBX21Q9UL17 535 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 TELO2Q9Y4R8 837 aa20.53■□□□□ 0.88
SNRPA1-201ENST00000254193 TLR3O15455 904 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 B4GALT4O60513 344 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 CD4P01730 458 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 ZNF286BP0CG31 522 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 RAG1P15918 1043 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 RBM25P49756 843 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 NLRP5P59047 1200 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 ARHGAP4P98171 946 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 MTMR1Q13613 665 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 METTL7BQ6UX53 244 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 SENP7Q9BQF6 1050 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 MXRA8Q9BRK3 442 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 SEZ6LQ9BYH1 1024 aa20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 UBE2OQ9C0C9 1292 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-201ENST00000254193 PPFIA4O75335 1185 aa20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 BMP8BP34820 402 aa20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 SP4Q02446 784 aa20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 BICD2Q8TD16 824 aa20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 GTF3C6Q969F1 213 aa20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 CDHR1Q96JP9 859 aa20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 TRMT13Q9NUP7 481 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-201ENST00000254193 NOP56O00567 594 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-201ENST00000254193 KCNA2P16389 499 aa20.5■□□□□ 0.87
SNRPA1-201ENST00000254193 ZNF76P36508 570 aa20.5■□□□□ 0.87
SNRPA1-201ENST00000254193 CEP55Q53EZ4 464 aa20.5■□□□□ 0.87
SNRPA1-201ENST00000254193 NFRKBQ6P4R8 1299 aa20.5■□□□□ 0.87
SNRPA1-201ENST00000254193 KCNH7Q9NS40 1196 aa20.5■□□□□ 0.87
SNRPA1-201ENST00000254193 F2P00734 622 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 ARP10275 920 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms