RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
VPS25-201ENST00000253794 FAM184BQ9ULE4 1060 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 WNT7AO00755 349 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 TBX3O15119 743 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 MSCO60682 206 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 ZNF76P36508 570 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 NUCB2P80303 420 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 EEPD1Q7L9B9 569 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 FERMT3Q86UX7 667 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 EMID1Q96A84 441 aaPredicted RBP16.02■□□□□ 0.16
VPS25-201ENST00000253794 WDR11Q9BZH6 1224 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 HMX1Q9NP08 348 aaPredicted RBP16.02■□□□□ 0.16
VPS25-201ENST00000253794 KCNMB3Q9NPA1 279 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 RTEL1Q9NZ71 1219 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
VPS25-201ENST00000253794 GNEQ9Y223 722 aaKnown RBP16.02■□□□□ 0.16
VPS25-201ENST00000253794 Q9Y3F1 56 aa16.02■□□□□ 0.16
VPS25-201ENST00000253794 ADCY6O43306 1168 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 ARIH2O95376 493 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 KCNA2P16389 499 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 ADCYAP1R1P41586 468 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 TTC38Q5R3I4 469 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 SEPT14Q6ZU15 432 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 GIMAP8Q8ND71 665 aaPredicted RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 ETNPPLQ8TBG4 499 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 AGO4Q9HCK5 861 aaKnown RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 DDX25Q9UHL0 483 aaKnown RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 MRVI1Q9Y6F6 885 aa16.01■□□□□ 0.15
VPS25-201ENST00000253794 MORC2Q9Y6X9 1032 aaPredicted RBP16.01■□□□□ 0.15
VPS25-201ENST00000253794 NFASCO94856 1347 aa16■□□□□ 0.15
VPS25-201ENST00000253794 C11orf97A0A1B0GVM6 126 aaPredicted RBP16■□□□□ 0.15
VPS25-201ENST00000253794 MSH4O15457 936 aa16■□□□□ 0.15
VPS25-201ENST00000253794 SLC37A4O43826 429 aa16■□□□□ 0.15
VPS25-201ENST00000253794 DUSP11O75319 330 aaKnown RBP16■□□□□ 0.15
VPS25-201ENST00000253794 ARP10275 920 aa16■□□□□ 0.15
VPS25-201ENST00000253794 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
VPS25-201ENST00000253794 SMPD1P17405 629 aa16■□□□□ 0.15
VPS25-201ENST00000253794 CAPN2P17655 700 aa16■□□□□ 0.15
VPS25-201ENST00000253794 UBA1P22314 1058 aaKnown RBP16■□□□□ 0.15
VPS25-201ENST00000253794 SP2Q02086 613 aa16■□□□□ 0.15
VPS25-201ENST00000253794 TNFAIP2Q03169 654 aa16■□□□□ 0.15
VPS25-201ENST00000253794 NEDD9Q14511 834 aa16■□□□□ 0.15
VPS25-201ENST00000253794 PRR16Q569H4 304 aa16■□□□□ 0.15
VPS25-201ENST00000253794 LHX8Q68G74 356 aa16■□□□□ 0.15
VPS25-201ENST00000253794 SLC5A5Q92911 643 aa16■□□□□ 0.15
VPS25-201ENST00000253794 ZFP91Q96JP5 570 aaPredicted RBP16■□□□□ 0.15
VPS25-201ENST00000253794 FAM20AQ96MK3 541 aa16■□□□□ 0.15
VPS25-201ENST00000253794 RIT2Q99578 217 aa16■□□□□ 0.15
VPS25-201ENST00000253794 XRN2Q9H0D6 950 aaKnown RBP eCLIP16■□□□□ 0.15
VPS25-201ENST00000253794 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
VPS25-201ENST00000253794 DDX20Q9UHI6 824 aaKnown RBP16■□□□□ 0.15
VPS25-201ENST00000253794 DHX15O43143 795 aaKnown RBP15.99■□□□□ 0.15
VPS25-201ENST00000253794 ATP9AO75110 1047 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 CCL5P13501 91 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 ARHGAP1Q07960 439 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 MTMR9Q96QG7 549 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 UNC93B1Q9H1C4 597 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 PCDHB6Q9Y5E3 794 aa15.99■□□□□ 0.15
VPS25-201ENST00000253794 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
VPS25-201ENST00000253794 LAD1O00515 517 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 NEMFO60524 1076 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 BMP15O95972 392 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 GH1P01241 217 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 RARBP10826 455 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 GJA9P57773 515 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 ITGB3BPQ13352 177 aaPredicted RBP15.98■□□□□ 0.15
VPS25-201ENST00000253794 MTFR1Q15390 333 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 LY6KQ17RY6 165 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 CELF3Q5SZQ8 465 aaKnown RBP15.98■□□□□ 0.15
VPS25-201ENST00000253794 TMEM63BQ5T3F8 832 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 METTL7BQ6UX53 244 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 B3GNT9Q6UX72 402 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 HAS1Q92839 578 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 ZNF577Q9BSK1 485 aa15.98■□□□□ 0.15
VPS25-201ENST00000253794 BRCA2P51587 3418 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 POTEFA5A3E0 1075 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 ADAMTS4O75173 837 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 PSMD10O75832 226 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 FARP2O94887 1054 aaPredicted RBP15.97■□□□□ 0.15
VPS25-201ENST00000253794 GJB1P08034 283 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
VPS25-201ENST00000253794 CST5P28325 142 aaPredicted RBP15.97■□□□□ 0.15
VPS25-201ENST00000253794 MCM7P33993 719 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 PRPHP41219 470 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 ATP2C1P98194 919 aaPredicted RBP15.97■□□□□ 0.15
VPS25-201ENST00000253794 LAMC2Q13753 1193 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 NBR1Q14596 966 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 SLFN12Q8IYM2 578 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 CRISPLD2Q9H0B8 497 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 POLR3EQ9NVU0 708 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 CHMP5Q9NZZ3 219 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms