RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 GH2P01242 217 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 H2AFXP16104 143 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 DNM2P50570 870 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 PPP2R3AQ06190 1150 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 USH1GQ495M9 461 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 TMEM179Q6ZVK1 233 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 ANO3Q9BYT9 981 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 DDX41Q9UJV9 622 aaKnown RBP20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 PCDHA12Q9UN75 941 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 LUC7L2Q9Y383 392 aaKnown RBP20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 REXO2Q9Y3B8 237 aaKnown RBP20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 ERCC3P19447 782 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 ARHGAP25P42331 645 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 TBC1D8BQ0IIM8 1120 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 CENPPQ6IPU0 288 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 WDR59Q6PJI9 974 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 OR8K1Q8NGG5 319 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 DNAJC7Q99615 494 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 NOC4LQ9BVI4 516 aaKnown RBP20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 CAPN11Q9UMQ6 739 aa20.84■□□□□ 0.93
PDLIM4-201ENST00000253754 PVALEFA0A1B0GWK0 134 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 MEIS2O14770 477 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 STAT3P40763 770 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 IKQ13123 557 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 TBC1D10BQ4KMP7 808 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 MIGA2Q7L4E1 593 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 FAM83AQ86UY5 434 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 FEZ1Q99689 392 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 TRIM10Q9UDY6 481 aa20.83■□□□□ 0.93
PDLIM4-201ENST00000253754 EFCAB8A8MWE9 144 aa20.83■□□□□ 0.92
PDLIM4-201ENST00000253754 SSBP05455 408 aaKnown RBP eCLIP20.83■□□□□ 0.92
PDLIM4-201ENST00000253754 COBLL1Q53SF7 1204 aa20.83■□□□□ 0.92
PDLIM4-201ENST00000253754 SPICE1Q8N0Z3 855 aa20.83■□□□□ 0.92
PDLIM4-201ENST00000253754 TTYH3Q9C0H2 523 aa20.83■□□□□ 0.92
PDLIM4-201ENST00000253754 TFR2Q9UP52 801 aa20.83■□□□□ 0.92
PDLIM4-201ENST00000253754 E9PMD0 336 aa20.82■□□□□ 0.92
PDLIM4-201ENST00000253754 TFRCP02786 760 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-201ENST00000253754 GCFC2P16383 781 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-201ENST00000253754 TRIM21P19474 475 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-201ENST00000253754 SLC35F6Q8N357 371 aa20.82■□□□□ 0.92
PDLIM4-201ENST00000253754 A0A1W2PRG0 241 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 POTEB3A0JP26 581 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 POTECB2RU33 542 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 NDUFA10O95299 355 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 MMP14P50281 582 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 CLCN6P51797 869 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 POTEBQ6S5H4 581 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 FAM114A1Q8IWE2 563 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 PCMTD1Q96MG8 357 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 FGFBP2Q9BYJ0 223 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 ZSWIM4Q9H7M6 989 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 EPN1Q9Y6I3 576 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 LMNB1P20700 586 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 CACNB1Q02641 598 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 EHHADHQ08426 723 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 RASA3Q14644 834 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 DNAJC19Q96DA6 116 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 KIAA1024Q9UPX6 916 aa20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 ASTN2O75129 1339 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-201ENST00000253754 NPHP3-ACAD11A0A0J9YXS1 232 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 PPP1R2P41236 205 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 TEX35Q5T0J7 233 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 KCNMB3Q9NPA1 279 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 OGFRQ9NZT2 677 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 TBC1D7Q9P0N9 293 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 RAD51AP2Q09MP3 1159 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 COASYQ13057 564 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 GPR162Q16538 588 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 GUF1Q8N442 669 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 GMCL1P1Q8NEA9 526 aa20.8■□□□□ 0.92
PDLIM4-201ENST00000253754 SYDE2Q5VT97 1194 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 AMNQ9BXJ7 453 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 HOXA13P31271 388 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 ECE1P42892 770 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 ARHGAP4P98171 946 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 PRR16Q569H4 304 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 FBXO11Q86XK2 927 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 GMCL1Q96IK5 515 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 PGAP2Q9UHJ9 254 aa20.79■□□□□ 0.92
PDLIM4-201ENST00000253754 EPHB6O15197 1021 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 MED24O75448 989 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 USP11P51784 963 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 HERVK_113P62684 666 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 KIF4BQ2VIQ3 1234 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 LRRC55Q6ZSA7 311 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 GPIHBP1Q8IV16 184 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 PUF60Q9UHX1 559 aaKnown RBP20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 BMP3P12645 472 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 KIAA1755Q5JYT7 1200 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 RSRC2Q7L4I2 434 aaKnown RBP20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 CRYGNQ8WXF5 182 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 GLT8D2Q9H1C3 349 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 PANK4Q9NVE7 773 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 HACL1Q9UJ83 578 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 GUCA1BQ9UMX6 200 aa20.78■□□□□ 0.92
PDLIM4-201ENST00000253754 SBF1O95248 1867 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 CYP3A7-CYP3A51PA0A087WV96 503 aa20.77■□□□□ 0.92
PDLIM4-201ENST00000253754 POTEFA5A3E0 1075 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms