RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PPTC7Q8NI37 304 aa26.36■■□□□ 1.81
LSM4-201ENST00000252816 KAT2BQ92831 832 aa26.36■■□□□ 1.81
LSM4-201ENST00000252816 NCOA5Q9HCD5 579 aaKnown RBP26.36■■□□□ 1.81
LSM4-201ENST00000252816 RIC8AQ9NPQ8 531 aa26.36■■□□□ 1.81
LSM4-201ENST00000252816 PCDHA6Q9UN73 950 aa26.36■■□□□ 1.81
LSM4-201ENST00000252816 PCDHA8Q9Y5H6 950 aa26.36■■□□□ 1.81
LSM4-201ENST00000252816 SPATA31C2B4DYI2 1134 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 hCG_1984214I3L0E3 225 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 PPFIA3O75145 1194 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 CCT2P78371 535 aaKnown RBP26.35■■□□□ 1.81
LSM4-201ENST00000252816 PKN1Q16512 942 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 DGKDQ16760 1214 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 HSDL1Q3SXM5 330 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 LRIT3Q3SXY7 679 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 C9orf50Q5SZB4 431 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 ZNF713Q8N859 430 aaPredicted RBP26.35■■□□□ 1.81
LSM4-201ENST00000252816 PHKBQ93100 1093 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 LRCH3Q96II8 777 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 PPP1R12CQ9BZL4 782 aa26.35■■□□□ 1.81
LSM4-201ENST00000252816 TRMT13Q9NUP7 481 aaKnown RBP26.35■■□□□ 1.81
LSM4-201ENST00000252816 SPDYE3A6NKU9 549 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 PRPF3O43395 683 aaKnown RBP26.34■■□□□ 1.81
LSM4-201ENST00000252816 HOXD8P13378 290 aaPredicted RBP26.34■■□□□ 1.81
LSM4-201ENST00000252816 SCG2P13521 617 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 SHHQ15465 462 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 FAM47CQ5HY64 1035 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 MFSD5Q6N075 450 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 NFRKBQ6P4R8 1299 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 SPATA33Q96N06 139 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 PDRG1Q9NUG6 133 aa26.34■■□□□ 1.81
LSM4-201ENST00000252816 MYH7BA7E2Y1 1941 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 SMCO2A6NFE2 343 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 FIBPO43427 364 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 SEC24BO95487 1268 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 ADCY7P51828 1080 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 CHMP4BP1P59074 171 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 FPGSQ05932 587 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 UMODL1Q5DID0 1318 aa26.33■■□□□ 1.81
LSM4-201ENST00000252816 ZNF286BP0CG31 522 aa26.32■■□□□ 1.8
LSM4-201ENST00000252816 CYP2C18P33260 490 aa26.32■■□□□ 1.8
LSM4-201ENST00000252816 ANAPC15P60006 121 aa26.32■■□□□ 1.8
LSM4-201ENST00000252816 ZNF274Q96GC6 653 aaPredicted RBP26.32■■□□□ 1.8
LSM4-201ENST00000252816 PGBD1Q96JS3 809 aa26.32■■□□□ 1.8
LSM4-201ENST00000252816 NOC4LQ9BVI4 516 aaKnown RBP26.32■■□□□ 1.8
LSM4-201ENST00000252816 HIPK3Q9H422 1215 aa26.32■■□□□ 1.8
LSM4-201ENST00000252816 MLXIPQ9HAP2 919 aa26.32■■□□□ 1.8
LSM4-201ENST00000252816 IFNAR1P17181 557 aa26.31■■□□□ 1.8
LSM4-201ENST00000252816 ITGB5P18084 799 aa26.31■■□□□ 1.8
LSM4-201ENST00000252816 TEX2Q8IWB9 1127 aa26.31■■□□□ 1.8
LSM4-201ENST00000252816 TMEM260Q9NX78 707 aa26.31■■□□□ 1.8
LSM4-201ENST00000252816 UBIAD1Q9Y5Z9 338 aa26.31■■□□□ 1.8
LSM4-201ENST00000252816 ADAMTS3O15072 1205 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 PPFIA4O75335 1185 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 F2P00734 622 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 CYP2C9P11712 490 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 CLK2P49760 499 aaKnown RBP26.3■■□□□ 1.8
LSM4-201ENST00000252816 PTPN11Q06124 597 aaPredicted RBP26.3■■□□□ 1.8
LSM4-201ENST00000252816 NEDD9Q14511 834 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 CYFIP1Q7L576 1253 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 NLRX1Q86UT6 975 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 SLC26A6Q9BXS9 759 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 RNF26Q9BY78 433 aaPredicted RBP26.3■■□□□ 1.8
LSM4-201ENST00000252816 TELO2Q9Y4R8 837 aa26.3■■□□□ 1.8
LSM4-201ENST00000252816 SUPT20HL2P0C7V6 817 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 CSF2RAP15509 400 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 PSEN2P49810 448 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 METTL7BQ6UX53 244 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 GPRASP2Q96D09 838 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 IL17RAQ96F46 866 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 ANO3Q9BYT9 981 aa26.29■■□□□ 1.8
LSM4-201ENST00000252816 ESYT2A0FGR8 921 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 HAS3O00219 553 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 ATP9AO75110 1047 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 FOSP01100 380 aaPredicted RBP26.28■■□□□ 1.8
LSM4-201ENST00000252816 AKAP17AQ02040 695 aaKnown RBP26.28■■□□□ 1.8
LSM4-201ENST00000252816 STK3Q13188 491 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 MFSD10Q14728 455 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 C16orf59Q7L2K0 433 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 SESTD1Q86VW0 696 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 SENP7Q9BQF6 1050 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 ZMYND12Q9H0C1 365 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 GLT8D2Q9H1C3 349 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 WNT8AQ9H1J5 351 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 EHMT1Q9H9B1 1298 aa26.28■■□□□ 1.8
LSM4-201ENST00000252816 KCNA2P16389 499 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 CCL23P55773 120 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 PPIGQ13427 754 aaKnown RBP eCLIP26.27■■□□□ 1.8
LSM4-201ENST00000252816 KIAA0753Q2KHM9 967 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 GDF6Q6KF10 455 aaPredicted RBP26.27■■□□□ 1.8
LSM4-201ENST00000252816 TMEM199Q8N511 208 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 CTAGE1Q96RT6 745 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 C16orf70Q9BSU1 422 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 ALG1Q9BT22 464 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 JADE2Q9NQC1 790 aa26.27■■□□□ 1.8
LSM4-201ENST00000252816 DOCK5Q9H7D0 1870 aa26.26■■□□□ 1.79
LSM4-201ENST00000252816 AP3B2Q13367 1082 aa26.26■■□□□ 1.79
LSM4-201ENST00000252816 JAKMIP3Q5VZ66 844 aa26.26■■□□□ 1.79
LSM4-201ENST00000252816 CYP2W1Q8TAV3 490 aa26.26■■□□□ 1.79
LSM4-201ENST00000252816 GPR20Q99678 358 aa26.26■■□□□ 1.79
LSM4-201ENST00000252816 KATNAL1Q9BW62 490 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms