RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 PANK4Q9NVE7 773 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 PLAGL2Q9UPG8 496 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 KIAA1024Q9UPX6 916 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 DUSP10Q9Y6W6 482 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 KRT86O43790 486 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 ECE2O60344 883 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 FGFR1OPO95684 399 aaKnown RBP21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 SSBP05455 408 aaKnown RBP eCLIP21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 RHOXF2BP0C7M4 288 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 HNRNPH3P31942 346 aaKnown RBP21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 MYOCDQ8IZQ8 938 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 NOA1Q8NC60 698 aaKnown RBP21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 RHOXF2Q9BQY4 288 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 NT5C3AQ9H0P0 336 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 KDM3AQ9Y4C1 1321 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEB3A0JP26 581 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTECB2RU33 542 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 GDF11O95390 407 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 USP11P51784 963 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEBQ6S5H4 581 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 KRT26Q7Z3Y9 468 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 ARHGAP20Q9P2F6 1191 aa21.69■■□□□ 1.06
CDC42EP1-201ENST00000249014 STAT3P40763 770 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 ICA1Q05084 483 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 FAM26FQ5R3K3 315 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 NAP1L4Q99733 375 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 GLT8D2Q9H1C3 349 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 MMRN2Q9H8L6 949 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 TBC1D7Q9P0N9 293 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 ZNF219Q9P2Y4 722 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 CYP3A7-CYP3A51PA0A087WV96 503 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 NPHP3-ACAD11A0A0J9YXS1 232 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 IPO7O95373 1038 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 CYP3A7P24462 503 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 FKBP1AP62942 108 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 CACNB1Q02641 598 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 PAPD7Q5XG87 772 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 ZNF771Q7L3S4 317 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 C2CD5Q86YS7 1000 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 CCDC155Q8N6L0 562 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 CRYGNQ8WXF5 182 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 IQCDQ96DY2 449 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 MBOAT7Q96N66 472 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 PURBQ96QR8 312 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 TSG101Q99816 390 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 PCDHA2Q9Y5H9 948 aa21.68■■□□□ 1.06
CDC42EP1-201ENST00000249014 F5H6K3 240 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEB2H3BUK9 544 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 PLSCR1O15162 318 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 SRGAP2O75044 1071 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 PLA2G4BP0C869 781 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 HOXA7P31268 230 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 TUBB4BP68371 445 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 HDLBPQ00341 1268 aaKnown RBP21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 KLRC3Q07444 240 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 FOXR2Q6PJQ5 311 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 HNRNPLLQ8WVV9 542 aaKnown RBP21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 CCDC42Q96M95 316 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 MED24O75448 989 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 VAV2P52735 878 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 JAG1P78504 1218 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 BEND6Q5SZJ8 279 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 TMEM179Q6ZVK1 233 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 CCDC84Q86UT8 332 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 TRIM34Q9BYJ4 488 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 SAR1BQ9Y6B6 198 aa21.67■■□□□ 1.06
CDC42EP1-201ENST00000249014 APBA3O96018 575 aa21.66■■□□□ 1.06
CDC42EP1-201ENST00000249014 TAL1P17542 331 aaPredicted RBP21.66■■□□□ 1.06
CDC42EP1-201ENST00000249014 GPIHBP1Q8IV16 184 aa21.66■■□□□ 1.06
CDC42EP1-201ENST00000249014 EHBP1Q8NDI1 1231 aa21.66■■□□□ 1.06
CDC42EP1-201ENST00000249014 BAP1Q92560 729 aa21.66■■□□□ 1.06
CDC42EP1-201ENST00000249014 MACROD2A1Z1Q3 448 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 LRRC53A6NM62 1247 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 CYP11B2P19099 503 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 VSNL1P62760 191 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 ARHGAP4P98171 946 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 FKBP3Q00688 224 aaKnown RBP21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 SPIRE1Q08AE8 756 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 RAD51AP2Q09MP3 1159 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 KCNMA1Q12791 1236 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 GPBP1Q86WP2 473 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 BMP2KQ9NSY1 1161 aaPredicted RBP21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 TRAF5O00463 557 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 MAP2K7O14733 419 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 NDUFB10O96000 172 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 AP3B2Q13367 1082 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 SMC1AQ14683 1233 aaKnown RBP21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 ABCB5Q2M3G0 1257 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 USH1GQ495M9 461 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 RRAGAQ7L523 313 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 ETNPPLQ8TBG4 499 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 MMS19Q96T76 1030 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 AMNQ9BXJ7 453 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 TDRD3Q9H7E2 651 aaKnown RBP21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 SERPINA10Q9UK55 444 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 COL4A3BPQ9Y5P4 624 aa21.65■■□□□ 1.06
CDC42EP1-201ENST00000249014 SMCHD1A6NHR9 2005 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEFA5A3E0 1075 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms