RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 BUB1O43683 1085 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 DNA2P51530 1060 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 PDIA5Q14554 519 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 TMEM119Q4V9L6 283 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 POTEBQ6S5H4 581 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 EHBP1Q8NDI1 1231 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 BAP1Q92560 729 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 PANK4Q9NVE7 773 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 NHSQ6T4R5 1651 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 PPEF1O14829 653 aaPredicted RBP28.32■■■□□ 2.12
RAB40C-201ENST00000248139 EIF3JO75822 258 aaKnown RBP28.32■■■□□ 2.12
RAB40C-201ENST00000248139 GPS2Q13227 327 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 CDC42EP5Q6NZY7 148 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 CACNA2D4Q7Z3S7 1137 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 CUL5Q93034 780 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 GBP3Q9H0R5 595 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 PPP1R2P41236 205 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 TUBB4BP68371 445 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 RASSF7Q02833 373 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 ARID5AQ03989 594 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 SH2D4AQ9H788 454 aa28.32■■■□□ 2.12
RAB40C-201ENST00000248139 CLK2P49760 499 aaKnown RBP28.31■■■□□ 2.12
RAB40C-201ENST00000248139 EHHADHQ08426 723 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 COBLL1Q53SF7 1204 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 MYOCDQ8IZQ8 938 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 MYH7BA7E2Y1 1941 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 CCDC40Q4G0X9 1142 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 ZNF662Q6ZS27 426 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 CREG2Q8IUH2 290 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 TXLNBQ8N3L3 684 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 CALCOCO1Q9P1Z2 691 aa28.31■■■□□ 2.12
RAB40C-201ENST00000248139 SLC7A5Q01650 507 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 TDRD12Q587J7 1177 aaKnown RBP28.3■■■□□ 2.12
RAB40C-201ENST00000248139 ZC3H12CQ9C0D7 883 aaKnown RBP28.3■■■□□ 2.12
RAB40C-201ENST00000248139 PLEKHA4Q9H4M7 779 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 POLRMTO00411 1230 aaKnown RBP28.3■■■□□ 2.12
RAB40C-201ENST00000248139 SLC1A4P43007 532 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 MAGEA1P43355 309 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 PPP4R3AQ6IN85 833 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 EXOC4Q96A65 974 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 SNX12Q9UMY4 172 aa28.3■■■□□ 2.12
RAB40C-201ENST00000248139 ZBTB5O15062 677 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 LRRC63Q05C16 580 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 FAM26FQ5R3K3 315 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 USO1O60763 962 aaKnown RBP28.29■■■□□ 2.12
RAB40C-201ENST00000248139 HNRNPH3P31942 346 aaKnown RBP28.29■■■□□ 2.12
RAB40C-201ENST00000248139 CDK17Q00537 523 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 ZSCAN26Q16670 478 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 HSP90B2PQ58FF3 399 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 GJD4Q96KN9 370 aaPredicted RBP28.29■■■□□ 2.12
RAB40C-201ENST00000248139 ADAMTSL1Q8N6G6 1762 aa28.29■■■□□ 2.12
RAB40C-201ENST00000248139 MRPL12P52815 198 aaKnown RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 ORC2Q13416 577 aaPredicted RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 P2RX7Q99572 595 aaKnown RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 DNAJC18Q9H819 358 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 PLIN4Q96Q06 1357 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 hCG_1984214I3L0E3 225 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 TACC1O75410 805 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 HOXA10P31260 410 aaPredicted RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 NAP1L1P55209 391 aaKnown RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 CKAP4Q07065 602 aaKnown RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 QRICH1Q2TAL8 776 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 ZNF713Q8N859 430 aaPredicted RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 MTMR8Q96EF0 704 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 TSG101Q99816 390 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 LRRC1Q9BTT6 524 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 DMGDHQ9UI17 866 aaKnown RBP28.28■■■□□ 2.12
RAB40C-201ENST00000248139 LY75O60449 1722 aa28.28■■■□□ 2.12
RAB40C-201ENST00000248139 MEIS1O00470 390 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 HERC4Q5GLZ8 1057 aaPredicted RBP28.27■■■□□ 2.12
RAB40C-201ENST00000248139 CCDC84Q86UT8 332 aaPredicted RBP28.27■■■□□ 2.12
RAB40C-201ENST00000248139 SEPT12Q8IYM1 358 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 BCAS3Q9H6U6 928 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 CAPN2P17655 700 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 APOBEC3HQ6NTF7 200 aaKnown RBP28.27■■■□□ 2.12
RAB40C-201ENST00000248139 JRKLQ9Y4A0 524 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 PCDHA1Q9Y5I3 950 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 COL4A3BPQ9Y5P4 624 aa28.27■■■□□ 2.12
RAB40C-201ENST00000248139 POTEFA5A3E0 1075 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 TLR2O60603 784 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 POTEIP0CG38 1075 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 POLR2FP61218 127 aaKnown RBP28.26■■■□□ 2.12
RAB40C-201ENST00000248139 PDXDC1Q6P996 788 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 POTEGQ6S5H5 508 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 POTEEQ6S8J3 1075 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 GPBP1Q86WP2 473 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 TRIM58Q8NG06 486 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 MS4A14Q96JA4 679 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 DBNDD1Q9H9R9 158 aa28.26■■■□□ 2.12
RAB40C-201ENST00000248139 ANO9A1A5B4 782 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 NOL4O94818 638 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 SYF2O95926 243 aaKnown RBP28.26■■■□□ 2.11
RAB40C-201ENST00000248139 PLA2G4BP0C869 781 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 ZCWPW2Q504Y3 356 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 TAF3Q5VWG9 929 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 HGSNATQ68CP4 663 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 DNAAF5Q86Y56 855 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 LSM14BQ9BX40 385 aaKnown RBP28.26■■■□□ 2.11
RAB40C-201ENST00000248139 MED24O75448 989 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 ADRA2BP18089 450 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms