RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TMEM206Q9H813 350 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 SLC26A4O43511 780 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 SPOPO43791 374 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 CYP4A11Q02928 519 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 CCDC114Q96M63 670 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 EPN1Q9Y6I3 576 aaPredicted RBP17.28■□□□□ 0.36
SIN3B-201ENST00000248054 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 OSBPP22059 807 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 CCDC6Q16204 474 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 CFAP221Q4G0U5 840 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 FAM81BQ96LP2 452 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 NLRC4Q9NPP4 1024 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 CYP2J2P51589 502 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 SETDB1Q15047 1291 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 GRAMD1CQ8IYS0 662 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 HARSP12081 509 aaKnown RBP17.27■□□□□ 0.36
SIN3B-201ENST00000248054 FERP16591 822 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 SPATA24Q86W54 205 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 NDC80O14777 642 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 CCDC50Q8IVM0 306 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 SELENOSQ9BQE4 189 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 ADAM21Q9UKJ8 722 aa17.27■□□□□ 0.36
SIN3B-201ENST00000248054 PSMC2P35998 433 aaKnown RBP17.27■□□□□ 0.35
SIN3B-201ENST00000248054 IREB2P48200 963 aaKnown RBP17.27■□□□□ 0.35
SIN3B-201ENST00000248054 USP11P51784 963 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 PAK2Q13177 524 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 RPS6KA1Q15418 735 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 APOBEC3FQ8IUX4 373 aaKnown RBP17.27■□□□□ 0.35
SIN3B-201ENST00000248054 NEK9Q8TD19 979 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 SLC16A10Q8TF71 515 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 PANX2Q96RD6 677 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.35
SIN3B-201ENST00000248054 KIF28PB7ZC32 967 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 ARHGAP25P42331 645 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 LIG4P49917 911 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 MTMR3Q13615 1198 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
SIN3B-201ENST00000248054 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
SIN3B-201ENST00000248054 NYAP2Q9P242 653 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 PCDHA6Q9UN73 950 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 PCDHA8Q9Y5H6 950 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 SAR1BQ9Y6B6 198 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 KCTD2Q14681 263 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 ARMCX5Q6P1M9 558 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 ACCSQ96QU6 501 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 PLEKHA4Q9H4M7 779 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 GOLGA6CA6NDK9 693 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 GOLGA6DP0CG33 693 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 NR2F2P24468 414 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 PPP2R5EQ16537 467 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 EXOC3L4Q17RC7 722 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 GOLGA6AQ9NYA3 693 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 P4HA1P13674 534 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 CCDC144BQ3MJ40 725 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 MIS18BP1Q6P0N0 1132 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 CEP63Q96MT8 703 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 CTTNBP2NLQ9P2B4 639 aa17.26■□□□□ 0.35
SIN3B-201ENST00000248054 ZEB2O60315 1214 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 CASP14P31944 242 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 SLC8A3P57103 927 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 SLC20A2Q08357 652 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 NAA25Q14CX7 972 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 EAPPQ56P03 285 aaPredicted RBP17.25■□□□□ 0.35
SIN3B-201ENST00000248054 NCAPG2Q86XI2 1143 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 EFCAB13Q8IY85 973 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 SMC6Q96SB8 1091 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 F5H6K3 240 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 AKR1B1P15121 316 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 KLRC3Q07444 240 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 GSTA5Q7RTV2 222 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 SRLQ86TD4 932 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 PROM2Q8N271 834 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
SIN3B-201ENST00000248054 ATP2C2O75185 946 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 LONRF2Q1L5Z9 754 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
SIN3B-201ENST00000248054 CHGBP05060 677 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 ALDH3A1P30838 453 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 GPR162Q16538 588 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
SIN3B-201ENST00000248054 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
SIN3B-201ENST00000248054 SALL1Q9NSC2 1324 aa17.24■□□□□ 0.35
SIN3B-201ENST00000248054 TCP1P17987 556 aaKnown RBP17.24■□□□□ 0.35
SIN3B-201ENST00000248054 POLGP54098 1239 aaPredicted RBP17.24■□□□□ 0.35
SIN3B-201ENST00000248054 CACNB3P54284 484 aa17.24■□□□□ 0.35
SIN3B-201ENST00000248054 PPP1R7Q15435 360 aa17.24■□□□□ 0.35
SIN3B-201ENST00000248054 CCDC170Q8IYT3 715 aa17.24■□□□□ 0.35
SIN3B-201ENST00000248054 ADGRF4Q8IZF3 695 aa17.24■□□□□ 0.35
SIN3B-201ENST00000248054 PARVGQ9HBI0 331 aa17.24■□□□□ 0.35
SIN3B-201ENST00000248054 NKIRAS1Q9NYS0 192 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms