RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
FAM78A-201ENST00000247295 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
FAM78A-201ENST00000247295 EEPD1Q7L9B9 569 aa12.38□□□□□ -0.43
FAM78A-201ENST00000247295 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
FAM78A-201ENST00000247295 ABTB1Q969K4 478 aaPredicted RBP12.38□□□□□ -0.43
FAM78A-201ENST00000247295 ISCA1Q9BUE6 129 aa12.38□□□□□ -0.43
FAM78A-201ENST00000247295 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 TAF11Q15544 211 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 IWS1Q96ST2 819 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 FAM167BQ9BTA0 163 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 METTL14Q9HCE5 456 aaKnown RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 C1orf112Q9NSG2 853 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 FAM184BQ9ULE4 1060 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 POTEMA6NI47 508 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 BAG2O95816 211 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 GAS8O95995 478 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 PTPREP23469 700 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 CUL4BQ13620 913 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 MESDQ14696 234 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 ATG9AQ7Z3C6 839 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 KLHL29Q96CT2 875 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 GSG1L2A8MUP6 293 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 TBC1D8O95759 1140 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 STX2P32856 288 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 DBN1Q16643 649 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 DHTKD1Q96HY7 919 aaPredicted RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 AK8Q96MA6 479 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 TMEM47Q9BQJ4 181 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 VCX3BQ9H321 246 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 TRIM49BA6NDI0 452 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 FOXN1O15353 648 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 FAM133AQ8N9E0 248 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 LY9Q9HBG7 655 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 EPB41L5Q9HCM4 733 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
FAM78A-201ENST00000247295 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
FAM78A-201ENST00000247295 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 PABPN1LA6NDY0 278 aaKnown RBP12.36□□□□□ -0.43
FAM78A-201ENST00000247295 NDC80O14777 642 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 FTCDO95954 541 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 HSPA1LP34931 641 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 PSMD6Q15008 389 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 SCYL2Q6P3W7 929 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 TAOK1Q7L7X3 1001 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 DGKHQ86XP1 1220 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 VPS37BQ9H9H4 285 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 LAD1O00515 517 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
FAM78A-201ENST00000247295 GH2P01242 217 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 KRT31Q15323 416 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 CTAGE3PQ8IX95 158 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 FAM186BQ8IYM0 893 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 KRT12Q99456 494 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 TSC22D3Q99576 134 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 CCNE1P24864 410 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 TMOD1P28289 359 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 GGCXP38435 758 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
FAM78A-201ENST00000247295 PIK3R5Q8WYR1 880 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
FAM78A-201ENST00000247295 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
FAM78A-201ENST00000247295 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
FAM78A-201ENST00000247295 CTNND1O60716 968 aaKnown RBP12.35□□□□□ -0.43
FAM78A-201ENST00000247295 PSMC4P43686 418 aa12.35□□□□□ -0.43
FAM78A-201ENST00000247295 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms