RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TAAR1Q96RJ0 339 aa19.85■□□□□ 0.77
HOXC6-201ENST00000243108 RCOR1Q9UKL0 485 aa19.85■□□□□ 0.77
HOXC6-201ENST00000243108 SSRP1Q08945 709 aaKnown RBP19.84■□□□□ 0.77
HOXC6-201ENST00000243108 FSCN1Q16658 493 aaKnown RBP19.84■□□□□ 0.77
HOXC6-201ENST00000243108 LRIT3Q3SXY7 679 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 DUSP28Q4G0W2 176 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 CXCL17Q6UXB2 119 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 DNERQ8NFT8 737 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 TOX2Q96NM4 488 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 WDR11Q9BZH6 1224 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 KIAA1217Q5T5P2 1943 aa19.84■□□□□ 0.77
HOXC6-201ENST00000243108 GRIN2DO15399 1336 aa19.83■□□□□ 0.76
HOXC6-201ENST00000243108 KIAA0355O15063 1070 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 LETM1O95202 739 aaPredicted RBP19.82■□□□□ 0.76
HOXC6-201ENST00000243108 C9orf50Q5SZB4 431 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 WASF1Q92558 559 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 PGBD1Q96JS3 809 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 AIFM3Q96NN9 605 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 USP28Q96RU2 1077 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 RIOX1Q9H6W3 641 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 GJB4Q9NTQ9 266 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 Q9Y3F1 56 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 CDH23Q9H251 3354 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 ARVCFO00192 962 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 DDAH1O94760 285 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 CALM1P0DP23 149 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 CALM2P0DP24 149 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 CALM3P0DP25 149 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 EPHB4P54760 987 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 PDE4DQ08499 809 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 CATIPQ7Z7H3 387 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 VTI1AQ96AJ9 217 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 PIGSQ96S52 555 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 AMNQ9BXJ7 453 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 SLC26A6Q9BXS9 759 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 AP5M1Q9H0R1 490 aa19.82■□□□□ 0.76
HOXC6-201ENST00000243108 ZBTB5O15062 677 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 ARIH2O95376 493 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 SHHQ15465 462 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 KRT40Q6A162 431 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 TRIM22Q8IYM9 498 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 COPS5Q92905 334 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 PANK2Q9BZ23 570 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 TMEM39AQ9NV64 488 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 TBX21Q9UL17 535 aa19.81■□□□□ 0.76
HOXC6-201ENST00000243108 MRPL11Q9Y3B7 192 aaKnown RBP19.81■□□□□ 0.76
HOXC6-201ENST00000243108 A0A0U1RQG5 324 aaPredicted RBP19.8■□□□□ 0.76
HOXC6-201ENST00000243108 KIF28PB7ZC32 967 aa19.8■□□□□ 0.76
HOXC6-201ENST00000243108 HOMER1Q86YM7 354 aa19.8■□□□□ 0.76
HOXC6-201ENST00000243108 FAM126BQ8IXS8 530 aa19.8■□□□□ 0.76
HOXC6-201ENST00000243108 SLC43A3Q8NBI5 491 aa19.8■□□□□ 0.76
HOXC6-201ENST00000243108 RBM28Q9NW13 759 aaKnown RBP19.8■□□□□ 0.76
HOXC6-201ENST00000243108 RTEL1Q9NZ71 1219 aa19.8■□□□□ 0.76
HOXC6-201ENST00000243108 DCDC2CA8MYV0 355 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 DEXIO95424 95 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 PSMC6P62333 389 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 GHRHRQ02643 423 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 MYSM1Q5VVJ2 828 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 RMDN3Q96TC7 470 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 RNF26Q9BY78 433 aaPredicted RBP19.79■□□□□ 0.76
HOXC6-201ENST00000243108 FTOQ9C0B1 505 aaKnown RBP eCLIP19.79■□□□□ 0.76
HOXC6-201ENST00000243108 MAF1Q9H063 256 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 PCDHA1Q9Y5I3 950 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 GOLGA6L4A6NEF3 574 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 CFBP00751 764 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 LIG1P18858 919 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 HSD17B4P51659 736 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 FUT2Q10981 343 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 MCF2L2Q86YR7 1114 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 RBSNQ9H1K0 784 aa19.79■□□□□ 0.76
HOXC6-201ENST00000243108 CD4P01730 458 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 RAG1P15918 1043 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 U2AF2P26368 475 aaKnown RBP eCLIP19.78■□□□□ 0.76
HOXC6-201ENST00000243108 TRIM29Q14134 588 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 CCDC62Q6P9F0 684 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 NSUN6Q8TEA1 469 aaKnown RBP19.78■□□□□ 0.76
HOXC6-201ENST00000243108 SCFD2Q8WU76 684 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 POLR3EQ9NVU0 708 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 SCN10AQ9Y5Y9 1956 aa19.78■□□□□ 0.76
HOXC6-201ENST00000243108 EYSQ5T1H1 3165 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 YEATS4O95619 227 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 EIF2AK2P19525 551 aaKnown RBP19.77■□□□□ 0.76
HOXC6-201ENST00000243108 HOXA13P31271 388 aaPredicted RBP19.77■□□□□ 0.76
HOXC6-201ENST00000243108 NASPP49321 788 aaPredicted RBP19.77■□□□□ 0.76
HOXC6-201ENST00000243108 ITGA7Q13683 1181 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 Q7L0L9 218 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 OR6J1Q8NGC5 347 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 PIBF1Q8WXW3 757 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 TSPY26PQ9H489 355 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 PXMP2Q9NR77 195 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 MYH7BA7E2Y1 1941 aa19.77■□□□□ 0.76
HOXC6-201ENST00000243108 MROH7Q68CQ1 1323 aa19.77■□□□□ 0.75
HOXC6-201ENST00000243108 CABYRO75952 493 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 CEBPZQ03701 1054 aaKnown RBP19.76■□□□□ 0.75
HOXC6-201ENST00000243108 TPRNQ4KMQ1 711 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 DDX19AQ9NUU7 478 aaKnown RBP19.76■□□□□ 0.75
HOXC6-201ENST00000243108 TIMP1P01033 207 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 TXNP10599 105 aaKnown RBP19.76■□□□□ 0.75
HOXC6-201ENST00000243108 PURAQ00577 322 aaKnown RBP19.76■□□□□ 0.75
HOXC6-201ENST00000243108 SEPT14Q6ZU15 432 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms