RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZHX3Q9H4I2 956 aa15.56■□□□□ 0.08
PCDHB3-201ENST00000231130 MCM9Q9NXL9 1143 aa15.56■□□□□ 0.08
PCDHB3-201ENST00000231130 ECM29Q5VYK3 1845 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 BICDL2A1A5D9 508 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 CALM1P0DP23 149 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 CALM2P0DP24 149 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 CALM3P0DP25 149 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 FAM114A1Q8IWE2 563 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 GLIS3Q8NEA6 775 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 ATRNO75882 1429 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 PNPLA7Q6ZV29 1317 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 RHOBTB3O94955 611 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 SKOR1P84550 965 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 TFAP4Q01664 338 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 UBLCP1Q8WVY7 318 aaPredicted RBP15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 AP1M1Q9BXS5 423 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 TRIM9Q9C026 710 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 HGSO14964 777 aaPredicted RBP15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 DIAPH2O60879 1101 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 ANP32DO95626 131 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 FAM107AO95990 144 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 SCTRP47872 440 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 RAPGEF1Q13905 1077 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 PPP2R5BQ15173 497 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 HVCN1Q96D96 273 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 ZCWPW1Q9H0M4 648 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 SEMA6BQ9H3T3 888 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 TFCP2L1Q9NZI6 479 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 PLAGL2Q9UPG8 496 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 SPEF2Q9C093 1822 aa15.55■□□□□ 0.08
PCDHB3-201ENST00000231130 MYH6P13533 1939 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 USP17L3A6NCW0 530 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 USP17L4A6NCW7 530 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 PAK2Q13177 524 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 USP17L1Q7RTZ2 530 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 CASKIN2Q8WXE0 1202 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 DHTKD1Q96HY7 919 aaPredicted RBP15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 OSBPL7Q9BZF2 842 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 ADAMTS1Q9UHI8 967 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 MYH7P12883 1935 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 SMIM23A6NLE4 172 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 USP17L8P0C7I0 530 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 CALML3P27482 149 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 POLR2FP61218 127 aaKnown RBP15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 VWA3BQ502W6 1294 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 KLHDC7AQ5VTJ3 777 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 C4orf32Q8N8J7 132 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 TBC1D5Q92609 795 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 PACSIN1Q9BY11 444 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 PCDHA4Q9UN74 947 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 SRCAPQ6ZRS2 3230 aa15.54■□□□□ 0.08
PCDHB3-201ENST00000231130 KCNK3O14649 394 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 NELFCDQ8IXH7 590 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 RPUSD2Q8IZ73 545 aaKnown RBP15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 PNMA1Q8ND90 353 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 PIK3R5Q8WYR1 880 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 TRAPPC10P48553 1259 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 KIAA0753Q2KHM9 967 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 ARL6IP4Q66PJ3 421 aaKnown RBP15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 CCDC63Q8NA47 563 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 GJA10Q969M2 543 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 MKNK2Q9HBH9 465 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 TRPC6Q9Y210 931 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 GMNCA6NCL1 334 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 CEP104O60308 925 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 SMIM24O75264 130 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 KLRC1P26715 233 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 RETREG2Q8NC44 543 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 KIAA0895Q8NCT3 520 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 KBTBD4Q9NVX7 518 aa15.53■□□□□ 0.08
PCDHB3-201ENST00000231130 RAD51CO43502 376 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 KIF5BP33176 963 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 RANBP1P43487 201 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 NAPAP54920 295 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 ADAT2Q7Z6V5 191 aaKnown RBP15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 CUL5Q93034 780 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 PURBQ96QR8 312 aaKnown RBP15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 BIN2Q9UBW5 565 aaPredicted RBP15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 TMEM94Q12767 1356 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 TNS3Q68CZ2 1445 aa15.52■□□□□ 0.08
PCDHB3-201ENST00000231130 TRAF5O00463 557 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 DDAH1O94760 285 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 CTNNA1P35221 906 aaKnown RBP15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 ANKRD20A8PQ5CZ79 823 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 BZW1Q7L1Q6 419 aaKnown RBP15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 YTHDF3Q7Z739 585 aaKnown RBP15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 SLC44A5Q8NCS7 719 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 TAF4BQ92750 862 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 PCDHA6Q9UN73 950 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 PCDHA8Q9Y5H6 950 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms