RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 IKQ13123 557 aaPredicted RBP21.33■■□□□ 1.01
YBX3-201ENST00000228251 FIGNQ5HY92 759 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 FAM83BQ5T0W9 1011 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 NIM1KQ8IY84 436 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 ATRIPQ8WXE1 791 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 FAM20AQ96MK3 541 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 VCPKMTQ9H867 229 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 VAV3Q9UKW4 847 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 KIAA1024Q9UPX6 916 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 IGLV3-22A0A075B6J6 115 aa21.33■■□□□ 1
YBX3-201ENST00000228251 SPDYE3A6NKU9 549 aa21.33■■□□□ 1
YBX3-201ENST00000228251 PLA2G4BP0C869 781 aa21.33■■□□□ 1
YBX3-201ENST00000228251 CAP2P40123 477 aa21.33■■□□□ 1
YBX3-201ENST00000228251 SLC12A3P55017 1021 aa21.33■■□□□ 1
YBX3-201ENST00000228251 MEA1Q16626 185 aa21.33■■□□□ 1
YBX3-201ENST00000228251 PRR16Q569H4 304 aa21.33■■□□□ 1
YBX3-201ENST00000228251 WDR59Q6PJI9 974 aa21.33■■□□□ 1
YBX3-201ENST00000228251 CREBRFQ8IUR6 639 aa21.33■■□□□ 1
YBX3-201ENST00000228251 SPATA31C1P0DKV0 1188 aa21.32■■□□□ 1
YBX3-201ENST00000228251 CYP11B2P19099 503 aa21.32■■□□□ 1
YBX3-201ENST00000228251 GNG11P61952 73 aa21.32■■□□□ 1
YBX3-201ENST00000228251 TRAF1Q13077 416 aa21.32■■□□□ 1
YBX3-201ENST00000228251 RETREG2Q8NC44 543 aa21.32■■□□□ 1
YBX3-201ENST00000228251 OR8K1Q8NGG5 319 aa21.32■■□□□ 1
YBX3-201ENST00000228251 EEF2KMTQ96G04 330 aa21.32■■□□□ 1
YBX3-201ENST00000228251 MSH4O15457 936 aa21.31■■□□□ 1
YBX3-201ENST00000228251 PRKCSHP14314 528 aaPredicted RBP21.31■■□□□ 1
YBX3-201ENST00000228251 IDEP14735 1019 aa21.31■■□□□ 1
YBX3-201ENST00000228251 HOXA13P31271 388 aaPredicted RBP21.31■■□□□ 1
YBX3-201ENST00000228251 MAP3K9P80192 1104 aa21.31■■□□□ 1
YBX3-201ENST00000228251 ARSHQ5FYA8 562 aa21.31■■□□□ 1
YBX3-201ENST00000228251 CATSPER3Q86XQ3 398 aa21.31■■□□□ 1
YBX3-201ENST00000228251 PDCL2Q8N4E4 241 aa21.31■■□□□ 1
YBX3-201ENST00000228251 CHP1Q99653 195 aa21.31■■□□□ 1
YBX3-201ENST00000228251 PITPNM2Q9BZ72 1349 aa21.31■■□□□ 1
YBX3-201ENST00000228251 WNT10BO00744 389 aa21.31■■□□□ 1
YBX3-201ENST00000228251 RPA1P27694 616 aa21.31■■□□□ 1
YBX3-201ENST00000228251 ARHGAP25P42331 645 aa21.31■■□□□ 1
YBX3-201ENST00000228251 TGFB2P61812 414 aa21.31■■□□□ 1
YBX3-201ENST00000228251 TBC1D8BQ0IIM8 1120 aa21.31■■□□□ 1
YBX3-201ENST00000228251 KIF4BQ2VIQ3 1234 aa21.31■■□□□ 1
YBX3-201ENST00000228251 FAM26FQ5R3K3 315 aa21.31■■□□□ 1
YBX3-201ENST00000228251 HAUS3Q68CZ6 603 aa21.31■■□□□ 1
YBX3-201ENST00000228251 UIMC1Q96RL1 719 aa21.31■■□□□ 1
YBX3-201ENST00000228251 NUP58Q9BVL2 599 aa21.31■■□□□ 1
YBX3-201ENST00000228251 FGFBP2Q9BYJ0 223 aa21.31■■□□□ 1
YBX3-201ENST00000228251 DEFB129Q9H1M3 183 aa21.31■■□□□ 1
YBX3-201ENST00000228251 VEZTQ9HBM0 779 aa21.31■■□□□ 1
YBX3-201ENST00000228251 PANK4Q9NVE7 773 aa21.31■■□□□ 1
YBX3-201ENST00000228251 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.31■■□□□ 1
YBX3-201ENST00000228251 LUC7L2Q9Y383 392 aaKnown RBP21.31■■□□□ 1
YBX3-201ENST00000228251 REXO2Q9Y3B8 237 aaKnown RBP21.31■■□□□ 1
YBX3-201ENST00000228251 A0A1W2PQJ5 194 aa21.3■■□□□ 1
YBX3-201ENST00000228251 MTIF2P46199 727 aaKnown RBP21.3■■□□□ 1
YBX3-201ENST00000228251 NBPF9Q3BBW0 867 aa21.3■■□□□ 1
YBX3-201ENST00000228251 ZC3H3Q8IXZ2 948 aaKnown RBP21.3■■□□□ 1
YBX3-201ENST00000228251 ACRBPQ8NEB7 543 aa21.3■■□□□ 1
YBX3-201ENST00000228251 CHURC1Q8WUH1 139 aa21.3■■□□□ 1
YBX3-201ENST00000228251 NOC4LQ9BVI4 516 aaKnown RBP21.3■■□□□ 1
YBX3-201ENST00000228251 SIK3Q9Y2K2 1263 aa21.3■■□□□ 1
YBX3-201ENST00000228251 POTEFA5A3E0 1075 aa21.29■■□□□ 1
YBX3-201ENST00000228251 POTEIP0CG38 1075 aa21.29■■□□□ 1
YBX3-201ENST00000228251 CASQ1P31415 396 aa21.29■■□□□ 1
YBX3-201ENST00000228251 KLK7P49862 253 aa21.29■■□□□ 1
YBX3-201ENST00000228251 LRRC41Q15345 812 aa21.29■■□□□ 1
YBX3-201ENST00000228251 POTEGQ6S5H5 508 aa21.29■■□□□ 1
YBX3-201ENST00000228251 POTEEQ6S8J3 1075 aa21.29■■□□□ 1
YBX3-201ENST00000228251 GPBP1Q86WP2 473 aa21.29■■□□□ 1
YBX3-201ENST00000228251 MYOCDQ8IZQ8 938 aa21.29■■□□□ 1
YBX3-201ENST00000228251 CYP2W1Q8TAV3 490 aa21.29■■□□□ 1
YBX3-201ENST00000228251 TBC1D5Q92609 795 aa21.29■■□□□ 1
YBX3-201ENST00000228251 GLIS2Q9BZE0 524 aaPredicted RBP21.29■■□□□ 1
YBX3-201ENST00000228251 IRX2Q9BZI1 471 aaPredicted RBP21.29■■□□□ 1
YBX3-201ENST00000228251 PIM2Q9P1W9 311 aa21.29■■□□□ 1
YBX3-201ENST00000228251 STK24Q9Y6E0 443 aa21.29■■□□□ 1
YBX3-201ENST00000228251 PHF20L1A8MW92 1017 aa21.28■■□□□ 1
YBX3-201ENST00000228251 ZNF280AP59817 542 aaPredicted RBP21.28■■□□□ 1
YBX3-201ENST00000228251 MAN2A1Q16706 1144 aa21.28■■□□□ 1
YBX3-201ENST00000228251 VWA3BQ502W6 1294 aa21.28■■□□□ 1
YBX3-201ENST00000228251 MIGA2Q7L4E1 593 aa21.28■■□□□ 1
YBX3-201ENST00000228251 FAM160B2Q86V87 743 aa21.28■■□□□ 1
YBX3-201ENST00000228251 MRFAP1Q9Y605 127 aa21.28■■□□□ 1
YBX3-201ENST00000228251 PARP14Q460N5 1801 aa21.28■■□□□ 1
YBX3-201ENST00000228251 SHTN1A0MZ66 631 aa21.28■■□□□ 1
YBX3-201ENST00000228251 URI1O94763 535 aaPredicted RBP21.28■■□□□ 1
YBX3-201ENST00000228251 FGFR1OPO95684 399 aaKnown RBP21.28■■□□□ 1
YBX3-201ENST00000228251 ELF2Q15723 593 aa21.28■■□□□ 1
YBX3-201ENST00000228251 CIAPIN1Q6FI81 312 aa21.28■■□□□ 1
YBX3-201ENST00000228251 CCDC65Q8IXS2 484 aa21.28■■□□□ 1
YBX3-201ENST00000228251 SYT2Q8N9I0 419 aaPredicted RBP21.28■■□□□ 1
YBX3-201ENST00000228251 IQCDQ96DY2 449 aa21.28■■□□□ 1
YBX3-201ENST00000228251 WDR18Q9BV38 432 aa21.28■■□□□ 1
YBX3-201ENST00000228251 SH2D4AQ9H788 454 aa21.28■■□□□ 1
YBX3-201ENST00000228251 BMP2KQ9NSY1 1161 aaPredicted RBP21.28■■□□□ 1
YBX3-201ENST00000228251 AGPAT5Q9NUQ2 364 aa21.28■■□□□ 1
YBX3-201ENST00000228251 CGNQ9P2M7 1197 aaKnown RBP21.28■■□□□ 1
YBX3-201ENST00000228251 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.28■■□□□ 1
YBX3-201ENST00000228251 EPN1Q9Y6I3 576 aaPredicted RBP21.28■■□□□ 1
YBX3-201ENST00000228251 V9GYY5 206 aaPredicted RBP21.28■■□□□ 1
YBX3-201ENST00000228251 NPHP3-ACAD11A0A0J9YXS1 232 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms