RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PQBP1O60828 265 aaKnown RBP14.51□□□□□ -0.09
LSM5-201ENST00000223084 STAM2O75886 525 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 CDKL5O76039 1030 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 GGPS1O95749 300 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 FOSP01100 380 aaPredicted RBP14.51□□□□□ -0.09
LSM5-201ENST00000223084 ITGB5P18084 799 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 CPT1AP50416 773 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 NLRP5P59047 1200 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 GNPTABQ3T906 1256 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 CELF3Q5SZQ8 465 aaKnown RBP14.51□□□□□ -0.09
LSM5-201ENST00000223084 C1orf53Q5VUE5 145 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 XRRA1Q6P2D8 792 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 DHX37Q8IY37 1157 aaKnown RBP14.51□□□□□ -0.09
LSM5-201ENST00000223084 CCDC148Q8NFR7 591 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 PPP1R13LQ8WUF5 828 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 EHMT1Q9H9B1 1298 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
LSM5-201ENST00000223084 LIMCH1Q9UPQ0 1083 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 GRIN2DO15399 1336 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 A0A0U1RQG5 324 aaPredicted RBP14.5□□□□□ -0.09
LSM5-201ENST00000223084 SPATA31C2B4DYI2 1134 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 ARVCFO00192 962 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 FIBPO43427 364 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 JAK2O60674 1132 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 CABYRO75952 493 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 MMP3P08254 477 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 GNA11P29992 359 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 ICAM3P32942 547 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 PURAQ00577 322 aaKnown RBP14.5□□□□□ -0.09
LSM5-201ENST00000223084 AP3B2Q13367 1082 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 LAMC2Q13753 1193 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 BRDTQ58F21 947 aaPredicted RBP14.5□□□□□ -0.09
LSM5-201ENST00000223084 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 KCNV1Q6PIU1 500 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 SH3RF1Q7Z6J0 888 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 NLRX1Q86UT6 975 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 REXO1Q8N1G1 1221 aaKnown RBP14.5□□□□□ -0.09
LSM5-201ENST00000223084 CYP2W1Q8TAV3 490 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 TBC1D32Q96NH3 1257 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 SH3GLB2Q9NR46 395 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 GJB4Q9NTQ9 266 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 POLR3EQ9NVU0 708 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 PKD2L1Q9P0L9 805 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 ORC3Q9UBD5 711 aaPredicted RBP14.5□□□□□ -0.09
LSM5-201ENST00000223084 KCNJ14Q9UNX9 436 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 UBIAD1Q9Y5Z9 338 aa14.5□□□□□ -0.09
LSM5-201ENST00000223084 ATP9AO75110 1047 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 TGFB3P10600 412 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 FDPSP14324 419 aaKnown RBP14.49□□□□□ -0.09
LSM5-201ENST00000223084 SREBF1P36956 1147 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 CDK7P50613 346 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 CHMP4BP1P59074 171 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 ARHGAP4P98171 946 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 ITGA7Q13683 1181 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 RABEP1Q15276 862 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 CYFIP1Q7L576 1253 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 CCDC83Q8IWF9 413 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 NSUN7Q8NE18 718 aaKnown RBP14.49□□□□□ -0.09
LSM5-201ENST00000223084 EMID1Q96A84 441 aaPredicted RBP14.49□□□□□ -0.09
LSM5-201ENST00000223084 SPATA33Q96N06 139 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 MTG1Q9BT17 334 aaPredicted RBP14.49□□□□□ -0.09
LSM5-201ENST00000223084 BACH2Q9BYV9 841 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 MLXIPQ9HAP2 919 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 JADE2Q9NQC1 790 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 PRDM5Q9NQX1 630 aaPredicted RBP14.49□□□□□ -0.09
LSM5-201ENST00000223084 TELO2Q9Y4R8 837 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 SCN10AQ9Y5Y9 1956 aa14.49□□□□□ -0.09
LSM5-201ENST00000223084 STK36Q9NRP7 1315 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 TRIM43BA6NCK2 446 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 NPY5RQ15761 445 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 ANKRD33Q7Z3H0 272 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 TEX2Q8IWB9 1127 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 BICD2Q8TD16 824 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 TRIM43Q96BQ3 446 aaPredicted RBP14.48□□□□□ -0.09
LSM5-201ENST00000223084 GPRASP2Q96D09 838 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 MXRA8Q9BRK3 442 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 PDLIM7Q9NR12 457 aa14.48□□□□□ -0.09
LSM5-201ENST00000223084 DCDC2CA8MYV0 355 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 KPNA6O60684 536 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 CLTBP09497 229 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 ZNF286BP0CG31 522 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 ARP10275 920 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 KCNA2P16389 499 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 ZNF76P36508 570 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 FOSBP53539 338 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 SP4Q02446 784 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 FAAP100Q0VG06 881 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 MTMR1Q13613 665 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 NEDD9Q14511 834 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 DGKDQ16760 1214 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 NBPF20Q3BBV1 942 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
LSM5-201ENST00000223084 FAM126BQ8IXS8 530 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 BLIDQ8IZY5 108 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 SLC43A3Q8NBI5 491 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 KAT2BQ92831 832 aa14.47□□□□□ -0.09
LSM5-201ENST00000223084 UIMC1Q96RL1 719 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms