RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 STXBP2Q15833 593 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 MCF2LO15068 1137 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 STMN1P16949 149 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 INPP1P49441 399 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 TMCO4Q5TGY1 634 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 DNAJC24Q6P3W2 148 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 FAM186BQ8IYM0 893 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 LARP4BQ92615 738 aaKnown RBP11.45□□□□□ -0.58
TRPS1-201ENST00000220888 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 TNPO2O14787 897 aaKnown RBP11.45□□□□□ -0.58
TRPS1-201ENST00000220888 CPP00450 1065 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
TRPS1-201ENST00000220888 HPCAL4Q9UM19 191 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 PCDHA4Q9UN74 947 aa11.45□□□□□ -0.58
TRPS1-201ENST00000220888 UGGT2Q9NYU1 1516 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 K7ERI5 159 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 PRPSAP2O60256 369 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 CIAO1O76071 339 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 NR2F2P24468 414 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 COG7P83436 770 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 PTGDRQ13258 359 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 CABS1Q96KC9 395 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 LRGUKQ96M69 825 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 SYNDIG1Q9H7V2 258 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 MAGED2Q9UNF1 606 aaPredicted RBP11.44□□□□□ -0.58
TRPS1-201ENST00000220888 TBCCQ15814 346 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 PIGSQ96S52 555 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 CUEDC2Q9H467 287 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 PCIF1Q9H4Z3 704 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 TLK1Q9UKI8 766 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 TMEM247A6NEH6 219 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
TRPS1-201ENST00000220888 MESDQ14696 234 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 SLFN12LQ6IEE8 588 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 RWDD4Q6NW29 188 aaKnown RBP11.44□□□□□ -0.58
TRPS1-201ENST00000220888 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 TM6SF1Q9BZW5 370 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 PFKFB1P16118 471 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 CD58P19256 250 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 MAPK4P31152 587 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 TMEM179Q6ZVK1 233 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 HYOU1Q9Y4L1 999 aa11.44□□□□□ -0.58
TRPS1-201ENST00000220888 IFNA8P32881 189 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 CTNNA1P35221 906 aaKnown RBP11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PPARDQ03181 441 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PTK2BQ14289 1009 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 VEPH1Q14D04 833 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 CDC37Q16543 378 aaPredicted RBP11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PTPROQ16827 1216 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 ERO1AQ96HE7 468 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PLEKHA4Q9H4M7 779 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 DYRK4Q9NR20 520 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
TRPS1-201ENST00000220888 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 ERVV-1B6SEH8 477 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 KBTBD13C9JR72 458 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 TTLL4Q14679 1199 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 TTC23LQ6PF05 361 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 ADAT2Q7Z6V5 191 aaKnown RBP11.43□□□□□ -0.58
TRPS1-201ENST00000220888 TSC1Q92574 1164 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 RUNDC3BQ96NL0 473 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 CARD6Q9BX69 1037 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 BTBD18B2RXH4 712 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 BUB1O43683 1085 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PHKA2P46019 1235 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 TNFAIP2Q03169 654 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 MRPL47Q9HD33 250 aaKnown RBP11.43□□□□□ -0.58
TRPS1-201ENST00000220888 SAR1BQ9Y6B6 198 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PHLPP2Q6ZVD8 1323 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 PALLDQ8WX93 1383 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 LRRC31Q6UY01 552 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 EAF2Q96CJ1 260 aaPredicted RBP11.43□□□□□ -0.58
TRPS1-201ENST00000220888 AK8Q96MA6 479 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 CALN1Q9BXU9 219 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 CBX8Q9HC52 389 aa11.43□□□□□ -0.58
TRPS1-201ENST00000220888 KRT1P04264 644 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 SLC10A5Q5PT55 438 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 SCARA5Q6ZMJ2 495 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 KCTD6Q8NC69 237 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 EVI5O60447 810 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 HUS1O60921 280 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 PPFIA2O75334 1257 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 HSPA8P11142 646 aaKnown RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 ADORA1P30542 326 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 TRAPPC10P48553 1259 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 KLHL14Q9P2G3 628 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 MLH3Q9UHC1 1453 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 GNGT2O14610 69 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 SPATA17Q96L03 361 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms