RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GLIS3Q8NEA6 775 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 BAP1Q92560 729 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 RAD54LQ92698 747 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 SALL4Q9UJQ4 1053 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 HYOU1Q9Y4L1 999 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 NAV1Q8NEY1 1877 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 GPR75-ASB3A0A0A6YYF3 556 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 SMARCA1P28370 1054 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 LRRC63Q05C16 580 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 GFPT1Q06210 699 aaPredicted RBP19.13■□□□□ 0.65
USB1-201ENST00000219281 TANGO6Q9C0B7 1094 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 ESYT2A0FGR8 921 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 C6orf229H3BNL8 230 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 EDIL3O43854 480 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 TCP1P17987 556 aaKnown RBP19.12■□□□□ 0.65
USB1-201ENST00000219281 MFSD14BQ5SR56 506 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 CCDC181Q5TID7 509 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 PDXDC1Q6P996 788 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 LRRC55Q6ZSA7 311 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 KCNK18Q7Z418 384 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 SNX29Q8TEQ0 813 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 DDX12PQ92771 950 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 RIOX1Q9H6W3 641 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 ABCB11O95342 1321 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 RASSF7Q02833 373 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 ITIH3Q06033 890 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 CACNA2D4Q7Z3S7 1137 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 SP8Q8IXZ3 490 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 AKT1S1Q96B36 256 aa19.12■□□□□ 0.65
USB1-201ENST00000219281 BUB1O43683 1085 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 ADCY7P51828 1080 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 KRT79Q5XKE5 535 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 FAM76AQ8TAV0 307 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 FAM163AQ96GL9 167 aaPredicted RBP19.11■□□□□ 0.65
USB1-201ENST00000219281 TSG101Q99816 390 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 GOLGA6CA6NDK9 693 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 GOLGA6DP0CG33 693 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 RHBDL3P58872 404 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 KCNMA1Q12791 1236 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 ASTE1Q2TB18 679 aaPredicted RBP19.11■□□□□ 0.65
USB1-201ENST00000219281 GOLGA6AQ9NYA3 693 aa19.11■□□□□ 0.65
USB1-201ENST00000219281 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
USB1-201ENST00000219281 PJA2O43164 708 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 PPFIA4O75335 1185 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 PDHBP11177 359 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 SLC1A4P43007 532 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 NAP1L1P55209 391 aaKnown RBP19.1■□□□□ 0.65
USB1-201ENST00000219281 PDIA5Q14554 519 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 SKIDA1Q1XH10 827 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 MTMR8Q96EF0 704 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 RAB34Q9BZG1 259 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 NLRC4Q9NPP4 1024 aa19.1■□□□□ 0.65
USB1-201ENST00000219281 PLSCR1O15162 318 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 PAFAH1B1P43034 410 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 ECM1Q16610 540 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 TDRD12Q587J7 1177 aaKnown RBP19.09■□□□□ 0.65
USB1-201ENST00000219281 TLR10Q9BXR5 811 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 RIC8AQ9NPQ8 531 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 ATP6V0A2Q9Y487 856 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 DDX60LQ5H9U9 1706 aaKnown RBP19.09■□□□□ 0.65
USB1-201ENST00000219281 GOLGB1Q14789 3259 aaKnown RBP19.09■□□□□ 0.65
USB1-201ENST00000219281 RIMBP2O15034 1052 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 TNNI2P48788 182 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 EHHADHQ08426 723 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 PSMD2Q13200 908 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 TMEM119Q4V9L6 283 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 KLHDC7AQ5VTJ3 777 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 HGSNATQ68CP4 663 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 HAUS3Q68CZ6 603 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 TMC4Q7Z404 712 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 NLGN1Q8N2Q7 840 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 RUBCNQ92622 972 aa19.09■□□□□ 0.65
USB1-201ENST00000219281 ANKRD65E5RJM6 399 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 GTF2IP78347 998 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.65
USB1-201ENST00000219281 MYOCDQ8IZQ8 938 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 LRRC47Q8N1G4 583 aaKnown RBP19.08■□□□□ 0.65
USB1-201ENST00000219281 GJA10Q969M2 543 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 MS4A14Q96JA4 679 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 NOX5Q96PH1 765 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 LRRC27Q9C0I9 530 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 GPCPD1Q9NPB8 672 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 STIM2Q9P246 746 aa19.08■□□□□ 0.65
USB1-201ENST00000219281 hCG_1984214I3L0E3 225 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 APBA3O96018 575 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 EIF6P56537 245 aaKnown RBP19.08■□□□□ 0.64
USB1-201ENST00000219281 COASYQ13057 564 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 UBE2SQ16763 222 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 CCDC40Q4G0X9 1142 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 CERS3Q8IU89 383 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 ZNF713Q8N859 430 aaPredicted RBP19.08■□□□□ 0.64
USB1-201ENST00000219281 RBM12Q9NTZ6 932 aaKnown RBP19.08■□□□□ 0.64
USB1-201ENST00000219281 COL4A3BPQ9Y5P4 624 aa19.08■□□□□ 0.64
USB1-201ENST00000219281 GAKO14976 1311 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 SSU72P8A0A1W2PR75 194 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 VGLL3A8MV65 326 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 TRAF5O00463 557 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 SHOX2O60902 331 aaPredicted RBP19.07■□□□□ 0.64
USB1-201ENST00000219281 NOVP48745 357 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 EPHB4P54760 987 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms