RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 RASSF7Q02833 373 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 TMEM119Q4V9L6 283 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 C8orf74Q6P047 294 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 CACNA2D4Q7Z3S7 1137 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 RTFDC1Q9BY42 306 aaPredicted RBP24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 RAB34Q9BZG1 259 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 RBM12Q9NTZ6 932 aaKnown RBP24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 EIF3HO15372 352 aaKnown RBP eCLIP24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 SLC1A4P43007 532 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 CFAP221Q4G0U5 840 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 PACS2Q86VP3 889 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 PSMB7Q99436 277 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 CEP72Q9P209 647 aa24.48■■□□□ 1.51
HTATSF1-201ENST00000218364 ZCWPW2Q504Y3 356 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 GDF3Q9NR23 364 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 A6NNZ2 444 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 SLC37A4O43826 429 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 HSF2BPO75031 334 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 TUBB8Q3ZCM7 444 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 ANKRD13CQ8N6S4 541 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 DDX12PQ92771 950 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 VAT1LQ9HCJ6 419 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 LEMD3Q9Y2U8 911 aa24.47■■□□□ 1.51
HTATSF1-201ENST00000218364 A0A087WUV0 522 aaPredicted RBP24.46■■□□□ 1.51
HTATSF1-201ENST00000218364 MRPS25P82663 173 aaKnown RBP24.46■■□□□ 1.51
HTATSF1-201ENST00000218364 ANKRD65E5RJM6 399 aa24.46■■□□□ 1.51
HTATSF1-201ENST00000218364 SLC9C1Q4G0N8 1177 aa24.46■■□□□ 1.51
HTATSF1-201ENST00000218364 TTMPQ5BVD1 217 aa24.46■■□□□ 1.51
HTATSF1-201ENST00000218364 TPTE2Q6XPS3 522 aa24.46■■□□□ 1.51
HTATSF1-201ENST00000218364 DDX60LQ5H9U9 1706 aaKnown RBP24.45■■□□□ 1.51
HTATSF1-201ENST00000218364 SERPING1P05155 500 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 ATP2B2Q01814 1243 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 SEPT2Q15019 361 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 KRT79Q5XKE5 535 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 IFT20Q8IY31 132 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 NUDT12Q9BQG2 462 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 TRPC5Q9UL62 973 aaPredicted RBP24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 COL4A3BPQ9Y5P4 624 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 SBF2Q86WG5 1849 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 NOL4O94818 638 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 TDP2O95551 362 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 MYOCDQ8IZQ8 938 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 SNX29Q8TEQ0 813 aa24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 GJD4Q96KN9 370 aaPredicted RBP24.45■■□□□ 1.5
HTATSF1-201ENST00000218364 BUB1O43683 1085 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 TLR2O60603 784 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 CCT5P48643 541 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 GNGT1P63211 74 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 FKBP3Q00688 224 aaKnown RBP24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 KCNK18Q7Z418 384 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 GLIS3Q8NEA6 775 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 ARL8AQ96BM9 186 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 CEP95Q96GE4 821 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 POTEMA6NI47 508 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 EBAG9O00559 213 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 SFMBT2Q5VUG0 894 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 TADA2BQ86TJ2 420 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 DNAJC19Q96DA6 116 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 RUFY1Q96T51 708 aa24.44■■□□□ 1.5
HTATSF1-201ENST00000218364 APBA1Q02410 837 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 LRRC41Q15345 812 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 NAB2Q15742 525 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 SMIM5Q71RC9 77 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 UBA5Q9GZZ9 404 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 GRID2IPA4D2P6 1211 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 USP17L5A8MUK1 530 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 ADCY7P51828 1080 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 TDRD12Q587J7 1177 aaKnown RBP24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 FAM83BQ5T0W9 1011 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 BCAS4Q8TDM0 211 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 MS4A14Q96JA4 679 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 ZIM3Q96PE6 472 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 TANGO6Q9C0B7 1094 aa24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 LUC7LQ9NQ29 371 aaKnown RBP24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 SRP68Q9UHB9 627 aaKnown RBP24.43■■□□□ 1.5
HTATSF1-201ENST00000218364 GPR75-ASB3A0A0A6YYF3 556 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 BTDP43251 543 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 C15orf52Q6ZUT6 534 aaKnown RBP24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 GPIHBP1Q8IV16 184 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 IQCKQ8N0W5 287 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 CCDC24Q8N4L8 307 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 MREGQ8N565 214 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 CEP63Q96MT8 703 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 EHD4Q9H223 541 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 GLI1P08151 1106 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 COASYQ13057 564 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 QTRT2Q9H974 415 aaKnown RBP24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 ANKIB1Q9P2G1 1089 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 ATP6V0A2Q9Y487 856 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 MARSP56192 900 aaKnown RBP24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 PPP4R3AQ6IN85 833 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 ZNF804AQ7Z570 1209 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 NLRC4Q9NPP4 1024 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 PCDHGC5Q9Y5F6 944 aa24.42■■□□□ 1.5
HTATSF1-201ENST00000218364 MYH10P35580 1976 aa24.41■■□□□ 1.5
HTATSF1-201ENST00000218364 SHTN1A0MZ66 631 aa24.41■■□□□ 1.5
HTATSF1-201ENST00000218364 PDHBP11177 359 aa24.41■■□□□ 1.5
HTATSF1-201ENST00000218364 RC3H1Q5TC82 1133 aaKnown RBP24.41■■□□□ 1.5
HTATSF1-201ENST00000218364 RPS6KA4O75676 772 aa24.41■■□□□ 1.5
HTATSF1-201ENST00000218364 PALMO75781 387 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms