RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TCP11X2Q5H9J9 407 aa11.12□□□□□ -0.63
USP11-201ENST00000218348 ANKRD40Q6AI12 368 aa11.12□□□□□ -0.63
USP11-201ENST00000218348 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
USP11-201ENST00000218348 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
USP11-201ENST00000218348 RMND1Q9NWS8 449 aa11.12□□□□□ -0.63
USP11-201ENST00000218348 PCDHA12Q9UN75 941 aa11.12□□□□□ -0.63
USP11-201ENST00000218348 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
USP11-201ENST00000218348 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 SMCHD1A6NHR9 2005 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 PSMA7O14818 248 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 CHMP2AO43633 222 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 GYPCP04921 128 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 DLGAP5Q15398 846 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 TMEM132AQ24JP5 1023 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 ERCC6LQ2NKX8 1250 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 CDKAL1Q5VV42 579 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 SV2BQ7L1I2 683 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 ANKRD20A12PQ8NF67 263 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 FBXO28Q9NVF7 368 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 KIAA1024Q9UPX6 916 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 KRT9P35527 623 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 STIM1Q13586 685 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 IRF2BP1Q8IU81 584 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 PNMA5Q96PV4 448 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 KBTBD4Q9NVX7 518 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 TMOD2Q9NZR1 351 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 MAGEC2Q9UBF1 373 aaPredicted RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 ZNF70Q9UC06 446 aaPredicted RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 RWDD2AQ9UIY3 292 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 BIRC2Q13490 618 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 ENOX2Q16206 610 aaKnown RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 GPATCH4Q5T3I0 446 aaKnown RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 NCAPH2Q6IBW4 605 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 REXO1L1PQ8IX06 675 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 ELOA2Q8IYF1 753 aaPredicted RBP11.11□□□□□ -0.63
USP11-201ENST00000218348 C10orf67Q8IYJ2 551 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 CHP1Q99653 195 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 SLF1Q9BQI6 1058 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
USP11-201ENST00000218348 ARHGAP6O43182 974 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 KRT18P05783 430 aaKnown RBP11.1□□□□□ -0.63
USP11-201ENST00000218348 SNHG28P0DPA3 235 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 ZNF76P36508 570 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 PRPF38AQ8NAV1 312 aaKnown RBP11.1□□□□□ -0.63
USP11-201ENST00000218348 HAS1Q92839 578 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 RIC8AQ9NPQ8 531 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
USP11-201ENST00000218348 BLOC1S4Q9NUP1 217 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 LOC285556D6RIA3 1793 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 HNRNPH2P55795 449 aaKnown RBP11.1□□□□□ -0.63
USP11-201ENST00000218348 ETF1P62495 437 aaKnown RBP11.1□□□□□ -0.63
USP11-201ENST00000218348 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 LARP4BQ92615 738 aaKnown RBP11.1□□□□□ -0.63
USP11-201ENST00000218348 DDX12PQ92771 950 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 CCDC17Q96LX7 622 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 FGFBP2Q9BYJ0 223 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 TSPYL1Q9H0U9 437 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 HOMER2Q9NSB8 354 aa11.1□□□□□ -0.63
USP11-201ENST00000218348 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 ICE2Q659A1 982 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 ANO3Q9BYT9 981 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 TANGO6Q9C0B7 1094 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
USP11-201ENST00000218348 TRIM10Q9UDY6 481 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 TPM1P09493 284 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 NOVP48745 357 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 TERF2Q15554 542 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
USP11-201ENST00000218348 TRIM66O15016 1216 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 BMP3P12645 472 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 TBC1D8BQ0IIM8 1120 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 TMEM179Q6ZVK1 233 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 USP50Q70EL3 339 aaPredicted RBP11.09□□□□□ -0.63
USP11-201ENST00000218348 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 TUBGCP2Q9BSJ2 902 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
USP11-201ENST00000218348 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms