RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SSBP05455 408 aaKnown RBP eCLIP19.42■□□□□ 0.7
VRK1-201ENST00000216639 PLA2G4BP0C869 781 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 FCER1AP12319 257 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 RPA1P27694 616 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 BACE1P56817 501 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 TTI2Q6NXR4 508 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 POTEBQ6S5H4 581 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
VRK1-201ENST00000216639 GOLGB1Q14789 3259 aaKnown RBP19.41■□□□□ 0.7
VRK1-201ENST00000216639 ITIH6Q6UXX5 1313 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 E9PMD0 336 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 TPM2P07951 284 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 TPM1P09493 284 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 PTPRAP18433 802 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 COPB1P53618 953 aaKnown RBP19.41■□□□□ 0.7
VRK1-201ENST00000216639 CEP55Q53EZ4 464 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 PPFIBP1Q86W92 1011 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 CREBRFQ8IUR6 639 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 CCDC65Q8IXS2 484 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 CSGALNACT2Q8N6G5 542 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 SRRTQ9BXP5 876 aaKnown RBP19.41■□□□□ 0.7
VRK1-201ENST00000216639 SLC39A2Q9NP94 309 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 DNM3Q9UQ16 869 aa19.41■□□□□ 0.7
VRK1-201ENST00000216639 PITPNM2Q9BZ72 1349 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 C19orf81C9J6K1 198 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 SOCS7O14512 581 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 CCP110O43303 1012 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 MED24O75448 989 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 EPS15P42566 896 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 PMS1P54277 932 aaKnown RBP19.4■□□□□ 0.7
VRK1-201ENST00000216639 KRT26Q7Z3Y9 468 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 CATSPER3Q86XQ3 398 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 CPXCR1Q8N123 301 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 GUF1Q8N442 669 aaKnown RBP19.4■□□□□ 0.7
VRK1-201ENST00000216639 KIAA0895Q8NCT3 520 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 ZKSCAN4Q969J2 545 aaPredicted RBP19.4■□□□□ 0.7
VRK1-201ENST00000216639 POLR3CQ9BUI4 534 aaPredicted RBP19.4■□□□□ 0.7
VRK1-201ENST00000216639 FHDC1Q9C0D6 1143 aaPredicted RBP19.4■□□□□ 0.7
VRK1-201ENST00000216639 VAV3Q9UKW4 847 aa19.4■□□□□ 0.7
VRK1-201ENST00000216639 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.4■□□□□ 0.79e-13■□□□□ 9.4
VRK1-201ENST00000216639 TEX33O43247 280 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 FGFR1OPO95684 399 aaKnown RBP19.39■□□□□ 0.7
VRK1-201ENST00000216639 ALAS1P13196 640 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 PBX1P40424 430 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 GHRHRQ02643 423 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 GPBP1Q86WP2 473 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 CYP2W1Q8TAV3 490 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 TMX1Q9H3N1 280 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 PANK4Q9NVE7 773 aa19.39■□□□□ 0.7
VRK1-201ENST00000216639 KIF20AO95235 890 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 KRT18P05783 430 aaKnown RBP19.39■□□□□ 0.69
VRK1-201ENST00000216639 EHHADHQ08426 723 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 LRCH2Q5VUJ6 765 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 PRAMEF18Q5VWM3 479 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 CCAR2Q8N163 923 aaKnown RBP19.39■□□□□ 0.69
VRK1-201ENST00000216639 SLC5A5Q92911 643 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 DNAJC19Q96DA6 116 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 KLRG1Q96E93 195 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 C12orf42Q96LP6 360 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 WDR11Q9BZH6 1224 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 VPS16Q9H269 839 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 RAVER2Q9HCJ3 691 aaKnown RBP19.39■□□□□ 0.69
VRK1-201ENST00000216639 TAB2Q9NYJ8 693 aa19.39■□□□□ 0.69
VRK1-201ENST00000216639 POTEFA5A3E0 1075 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 AKR1B15C9JRZ8 316 aaPredicted RBP19.38■□□□□ 0.69
VRK1-201ENST00000216639 POTEIP0CG38 1075 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 HIRAP54198 1017 aaPredicted RBP19.38■□□□□ 0.69
VRK1-201ENST00000216639 COASYQ13057 564 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 PTPN21Q16825 1174 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 NOL9Q5SY16 702 aaKnown RBP19.38■□□□□ 0.69
VRK1-201ENST00000216639 ANKRD40Q6AI12 368 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 POTEGQ6S5H5 508 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 POTEEQ6S8J3 1075 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 CLEC4DQ8WXI8 215 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 PRIMPOLQ96LW4 560 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 TSG101Q99816 390 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 DUSP9Q99956 384 aaKnown RBP19.38■□□□□ 0.69
VRK1-201ENST00000216639 ZHX2Q9Y6X8 837 aa19.38■□□□□ 0.69
VRK1-201ENST00000216639 SMCHD1A6NHR9 2005 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 MEIS1O00470 390 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 ARHGAP6O43182 974 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 SPATA31C1P0DKV0 1188 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 UBXN2AP68543 259 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 LRRC63Q05C16 580 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 PPP2R5CQ13362 524 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 DGKZQ13574 1117 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 TRIM14Q14142 442 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 FOXR2Q6PJQ5 311 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 OTOP1Q7RTM1 612 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 IRF2BP1Q8IU81 584 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 BAG1Q99933 345 aaPredicted RBP19.37■□□□□ 0.69
VRK1-201ENST00000216639 EIF2AK1Q9BQI3 630 aaKnown RBP19.37■□□□□ 0.69
VRK1-201ENST00000216639 ZNF577Q9BSK1 485 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 TUFT1Q9NNX1 390 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 ADARB2Q9NS39 739 aaKnown RBP19.37■□□□□ 0.69
VRK1-201ENST00000216639 RPTORQ8N122 1335 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 NFIBO00712 420 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 STX10O60499 249 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 GAS7O60861 476 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms