RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ZNF212Q9UDV6 495 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 LRRN2O75325 713 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 CCDC142Q17RM4 750 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SLC26A7Q8TE54 656 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 HADHAP40939 763 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 ANO4Q32M45 955 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SAAL1Q96ER3 474 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 THOC1Q96FV9 657 aaKnown RBP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 EDEM3Q9BZQ6 932 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 POLE3Q9NRF9 147 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 APBA1Q02410 837 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 CNOT10Q9H9A5 744 aaKnown RBP15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 EXOC3L4Q17RC7 722 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 KIAA1841Q6NSI8 718 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 NFATC2IPQ8NCF5 419 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 STMN3Q9NZ72 180 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 SMCO2A6NFE2 343 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 ENC1O14682 589 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 GADD45BO75293 160 aaPredicted RBP15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 LRRC8BQ6P9F7 803 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 ADA2Q9NZK5 511 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 DCTN3O75935 186 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 TRIM37O94972 964 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 EEF2KMTQ96G04 330 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 YIPF3Q9GZM5 350 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 KIF14Q15058 1648 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 SCG2P13521 617 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 Q3C1V9 767 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 TDRD7Q8NHU6 1098 aaKnown RBP15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 H0Y626 953 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 TRIM16O95361 564 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 TAC1P20366 129 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 AP2B1P63010 937 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 TBL3Q12788 808 aaKnown RBP15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 C1orf146Q5VVC0 180 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 FAM149B1Q96BN6 582 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 FMO2Q99518 471 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 CAB39Q9Y376 341 aaPredicted RBP15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 CROCCQ5TZA2 2017 aa15.75■□□□□ 0.11
SPTLC2-201ENST00000216484 HSPA4LO95757 839 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 TRIM45Q9H8W5 580 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 WDR64B1ANS9 1081 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 DONSONQ9NYP3 566 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 ARHGAP26Q9UNA1 814 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 RNF103-CHMP3A0A140T963 221 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 DDAH1O94760 285 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 CEP55Q53EZ4 464 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 DHX38Q92620 1227 aaKnown RBP15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 GCNAQ96QF7 691 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 RRM2BQ7LG56 351 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 SEPT9Q9UHD8 586 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 A0A0G2JND7 137 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 PRDM1O75626 825 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 METTL23Q86XA0 190 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 FAM173BQ6P4H8 233 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 OTUB1Q96FW1 271 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 JRKLQ9Y4A0 524 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 MSH6P52701 1360 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 C10orf76Q5T2E6 689 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 ALS2CLQ60I27 953 aa15.74■□□□□ 0.11
SPTLC2-201ENST00000216484 RASGRF2O14827 1237 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 SEPT2Q15019 361 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 HIBCHQ6NVY1 386 aaPredicted RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 ZNF467Q7Z7K2 595 aaPredicted RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 EPN1Q9Y6I3 576 aaPredicted RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 UBXN8O00124 270 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 HIBADHP31937 336 aaKnown RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 RWDD2BP57060 319 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 MXD4Q14582 209 aaPredicted RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 GADL1Q6ZQY3 521 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 PYROXD1Q8WU10 500 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 WASLO00401 505 aaPredicted RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 BRD1O95696 1058 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 RPN1P04843 607 aaKnown RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 SLC39A2Q9NP94 309 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 PAIP2BQ9ULR5 123 aaKnown RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 IQANK1A0A1B0GTG1 560 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 ADCK1Q86TW2 530 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 TGFBRAP1Q8WUH2 860 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 TSC22D4Q9Y3Q8 395 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 CCHCR1Q8TD31 782 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 OSBPL10Q9BXB5 764 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 CASKIN1Q8WXD9 1431 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 IL16Q14005 1332 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 ACSL3O95573 720 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 ARL4AP40617 200 aa15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 NOP53Q9NZM5 478 aaKnown RBP15.73■□□□□ 0.11
SPTLC2-201ENST00000216484 SLC7A5Q01650 507 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 RWDD4Q6NW29 188 aaKnown RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ADAM9Q13443 819 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ACAD11Q709F0 780 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms