RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ARHGEF12Q9NZN5 1544 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 MLH3Q9UHC1 1453 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 INO80B-WBP1J3KQ70 363 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 FAM149B1Q96BN6 582 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 INO80BQ9C086 356 aaPredicted RBP14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 A6NJR5 290 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 BNIP3LO60238 219 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 HIP1RO75146 1068 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 USP27XA6NNY8 438 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 AFPP02771 609 aaKnown RBP14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 MMP1P03956 469 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 INHBAP08476 426 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 PDE1BQ01064 536 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 GNPTABQ3T906 1256 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 KMT5AQ9NQR1 393 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 SRGAP2CP0DJJ0 459 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 KITP10721 976 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 ADD2P35612 726 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 ERFP50548 548 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 DHX9Q08211 1270 aaKnown RBP14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 FAM186BQ8IYM0 893 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 CYTH2Q99418 400 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 HOMER3Q9NSC5 361 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 ALKBH8Q96BT7 664 aaKnown RBP14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 NFU1Q9UMS0 254 aa14.79□□□□□ -0.04
TGFBR3-201ENST00000212355 NNTQ13423 1086 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 MAP7Q14244 749 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 TRIM56Q9BRZ2 755 aaKnown RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 ERVV-2B6SEH9 535 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 NCK2O43639 380 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 LINC00301Q8NCQ3 95 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 CDC26Q8NHZ8 85 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 CFLARO15519 480 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 PCCAP05165 728 aaPredicted RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 ZNF658Q5TYW1 1059 aaPredicted RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 PIP4K2CQ8TBX8 421 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 PACSIN2Q9UNF0 486 aaPredicted RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 KIAA0232Q92628 1395 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 WHAMMQ8TF30 809 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 JPH2Q9BR39 696 aaPredicted RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 SH2B2O14492 632 aaPredicted RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 SYCP2LQ5T4T6 812 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 FBXO38Q6PIJ6 1188 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 TDRD7Q8NHU6 1098 aaKnown RBP14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 ANAPC5Q9UJX4 755 aa14.78□□□□□ -0.04
TGFBR3-201ENST00000212355 LOC102724428A0A0B4J2F2 783 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 PLS3P13797 630 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 TCP1P17987 556 aaKnown RBP14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 NCF2P19878 526 aaPredicted RBP14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 SIK1P57059 783 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 PPP2R5BQ15173 497 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 GOLGA5Q8TBA6 731 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 MAIP1Q8WWC4 291 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 NEDD4P46934 1319 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 DARS2Q6PI48 645 aaKnown RBP14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 RFX8Q6ZV50 586 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 KCTD6Q8NC69 237 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 TBC1D22AQ8WUA7 517 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 LBHD1Q9BQE6 289 aaPredicted RBP14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 TBX22Q9Y458 520 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 ATP7AQ04656 1500 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 WDR46O15213 610 aaKnown RBP14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 MECOMQ03112 1051 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 OXER1Q8TDS5 423 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 MAML1Q92585 1016 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 HEMGNQ9BXL5 484 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 STK24Q9Y6E0 443 aa14.77□□□□□ -0.04
TGFBR3-201ENST00000212355 MYO1FO00160 1098 aa14.77□□□□□ -0.05
TGFBR3-201ENST00000212355 CCDC195A0A1B0GUA6 201 aa14.77□□□□□ -0.05
TGFBR3-201ENST00000212355 MFAP3P55082 362 aa14.77□□□□□ -0.05
TGFBR3-201ENST00000212355 DBN1Q16643 649 aa14.77□□□□□ -0.05
TGFBR3-201ENST00000212355 BANK1Q8NDB2 785 aa14.77□□□□□ -0.05
TGFBR3-201ENST00000212355 HESX1Q9UBX0 185 aa14.77□□□□□ -0.05
TGFBR3-201ENST00000212355 PPP6R2O75170 966 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 ZNF18P17022 549 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 PSMC2P35998 433 aaKnown RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 RINT1Q6NUQ1 792 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 RSPH3Q86UC2 560 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 ADAM33Q9BZ11 813 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 XAB2Q9HCS7 855 aaKnown RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 ERBB4Q15303 1308 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 ADGRL2O95490 1459 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 PTK2Q05397 1052 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 RESTQ13127 1097 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 CEP170P1Q96L14 293 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 DAAM1Q9Y4D1 1078 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 CTNND1O60716 968 aaKnown RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 SASH1O94885 1247 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 CYB5R4Q7L1T6 521 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 FAM193BQ96PV7 902 aaPredicted RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 TMEM260Q9NX78 707 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 HDAC6Q9UBN7 1215 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 ZBBXA8MT70 800 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 RNF8O76064 485 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 GFPT1Q06210 699 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms