RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 ABCB4P21439 1286 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 SCP2P22307 547 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 SLC9C1Q4G0N8 1177 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 AMACRQ9UHK6 382 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 PLAGL2Q9UPG8 496 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 PNPLA7Q6ZV29 1317 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 NTSR2O95665 410 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 FECHP22830 423 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 MEA1Q16626 185 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 SFMBT2Q5VUG0 894 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 EMBQ6PCB8 327 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 MMGT1Q8N4V1 131 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 N4BP2L2Q92802 583 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-201ENST00000075430 FAM84BQ96KN1 310 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-201ENST00000075430 PIGSQ96S52 555 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 KCPQ6ZWJ8 1503 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-201ENST00000075430 MYZAPP0CAP1 466 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 SPRED3Q2MJR0 410 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 CNNM4Q6P4Q7 775 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 MYCBPAPQ8TBZ2 947 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 SLC24A3Q9HC58 644 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 ATP8A1Q9Y2Q0 1164 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 KIF1AQ12756 1690 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 FLT3P36888 993 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 TXNRD3Q86VQ6 643 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 C4orf32Q8N8J7 132 aa18.43■□□□□ 0.54
CTDP1-201ENST00000075430 PYM1Q9BRP8 204 aaKnown RBP18.43■□□□□ 0.54
CTDP1-201ENST00000075430 CHORDC1Q9UHD1 332 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-201ENST00000075430 DAPK3O43293 454 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 UBE2SQ16763 222 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 MGARPQ8TDB4 240 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 MLXIPLQ9NP71 852 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 DDAH1O94760 285 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 AMPD3Q01432 767 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 DHX9Q08211 1270 aaKnown RBP18.42■□□□□ 0.54
CTDP1-201ENST00000075430 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.543e-10■■■■■ 35
CTDP1-201ENST00000075430 QPCTQ16769 361 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 TCP11Q8WWU5 503 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 TTYH3Q9C0H2 523 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 KBTBD4Q9NVX7 518 aa18.42■□□□□ 0.54
CTDP1-201ENST00000075430 SEC63Q9UGP8 760 aaKnown RBP18.42■□□□□ 0.54
CTDP1-201ENST00000075430 C4AP0C0L4 1744 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 BCL9O00512 1426 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 ITGA4P13612 1032 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 NF2P35240 595 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 FAM83BQ5T0W9 1011 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 MICALCLQ6ZW33 695 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 KCNK18Q7Z418 384 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 CCDC13Q8IYE1 715 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 DDX12PQ92771 950 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 DCCP43146 1447 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 TMEM110-MUSTN1A8MSY1 372 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 CLTAP09496 248 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 MAGOHP61326 146 aaKnown RBP18.41■□□□□ 0.54
CTDP1-201ENST00000075430 RPS6KA1Q15418 735 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 HERC4Q5GLZ8 1057 aaPredicted RBP18.41■□□□□ 0.54
CTDP1-201ENST00000075430 MAGOHBQ96A72 148 aaKnown RBP18.41■□□□□ 0.54
CTDP1-201ENST00000075430 ZNF512BQ96KM6 892 aaPredicted RBP18.41■□□□□ 0.54
CTDP1-201ENST00000075430 TACO1Q9BSH4 297 aaKnown RBP18.41■□□□□ 0.54
CTDP1-201ENST00000075430 FGFBP2Q9BYJ0 223 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 NAA25Q14CX7 972 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 PTGISQ16647 500 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 IL17RBQ9NRM6 502 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 KLC4Q9NSK0 619 aa18.41■□□□□ 0.54
CTDP1-201ENST00000075430 MDH1P40925 334 aaKnown RBP18.4■□□□□ 0.54
CTDP1-201ENST00000075430 ARL6IP4Q66PJ3 421 aaKnown RBP18.4■□□□□ 0.54
CTDP1-201ENST00000075430 TSG101Q99816 390 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 SH3GL2Q99962 352 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 FBXL5Q9UKA1 691 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.4■□□□□ 0.54
CTDP1-201ENST00000075430 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 LMTK3Q96Q04 1460 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 SHOX2O60902 331 aaPredicted RBP18.4■□□□□ 0.54
CTDP1-201ENST00000075430 TRAPPC10P48553 1259 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 PPP2R5BQ15173 497 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 PPP1R7Q15435 360 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 CALCRLQ16602 461 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 FAM133BQ5BKY9 247 aaKnown RBP18.4■□□□□ 0.54
CTDP1-201ENST00000075430 ALS2CLQ60I27 953 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 DAAM2Q86T65 1068 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 CCDC25Q86WR0 208 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 LRRC47Q8N1G4 583 aaKnown RBP18.4■□□□□ 0.54
CTDP1-201ENST00000075430 EPN3Q9H201 632 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 LRRC4CQ9HCJ2 640 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 MYH6P13533 1939 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 KRIT1O00522 736 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 PICALMQ13492 652 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 ATP6V1G3Q96LB4 118 aa18.4■□□□□ 0.54
CTDP1-201ENST00000075430 MEIS1O00470 390 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 CCDC172P0C7W6 258 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 SLURP2P0DP57 97 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 ZNF211Q13398 564 aaPredicted RBP18.39■□□□□ 0.53
CTDP1-201ENST00000075430 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 LARP4BQ92615 738 aaKnown RBP18.39■□□□□ 0.53
CTDP1-201ENST00000075430 TRIM51Q9BSJ1 452 aa18.39■□□□□ 0.53
CTDP1-201ENST00000075430 GJB7Q6PEY0 223 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms