RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CRNKL1Q9BZJ0 848 aaKnown RBP22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 POTEMA6NI47 508 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 PRDX5P30044 214 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 ELF1P32519 619 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 FLT3P36888 993 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 UHMK1Q8TAS1 419 aaKnown RBP22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 LUC7LQ9NQ29 371 aaKnown RBP22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 FBXL5Q9UKA1 691 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 LRP6O75581 1613 aa22.08■■□□□ 1.12
PPP1R3F-201ENST00000055335 SMTNP53814 917 aa22.08■■□□□ 1.12
PPP1R3F-201ENST00000055335 CYB5D1Q6P9G0 228 aa22.08■■□□□ 1.12
PPP1R3F-201ENST00000055335 DDX60Q8IY21 1712 aaKnown RBP22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 CDC37Q16543 378 aaPredicted RBP22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 FIGNQ5HY92 759 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 PARP9Q8IXQ6 854 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 CACNA2D3Q8IZS8 1091 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 WHAMMQ8TF30 809 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 OSBPL7Q9BZF2 842 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 VEZTQ9HBM0 779 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 AMACRQ9UHK6 382 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 SMCO2A6NFE2 343 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 NAA25Q14CX7 972 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 CHADLQ6NUI6 762 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 PNMA8AQ86V59 439 aaPredicted RBP22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 ZNF384Q8TF68 577 aa22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 TAF1DQ9H5J8 278 aaPredicted RBP22.07■■□□□ 1.12
PPP1R3F-201ENST00000055335 DAPK3O43293 454 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TSPY3P0CV98 308 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TSPY8P0CW00 308 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 CLNS1AP54105 237 aaKnown RBP22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 MECOMQ03112 1051 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 RCSD1Q6JBY9 416 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TSG101Q99816 390 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TMEM260Q9NX78 707 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 HGSO14964 777 aaPredicted RBP22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 CYTH3O43739 400 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 KLRK1P26718 216 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 GBP2P32456 591 aaPredicted RBP22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 PPP1R7Q15435 360 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TBCKQ8TEA7 893 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 SEC16BQ96JE7 1060 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 SELENOSQ9BQE4 189 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 BRIP1Q9BX63 1249 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 CCDC113Q9H0I3 377 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TMBIM4Q9HC24 238 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 SLC24A3Q9HC58 644 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 PHRF1Q9P1Y6 1649 aaKnown RBP22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 PDE6BP35913 854 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 SOGA3Q5TF21 947 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 CELF4Q9BZC1 486 aaKnown RBP22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TSKSQ9UJT2 592 aa22.06■■□□□ 1.12
PPP1R3F-201ENST00000055335 TLR2O60603 784 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 MYL1P05976 194 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 NONOQ15233 471 aaKnown RBP eCLIP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 TMED8Q6PL24 325 aaPredicted RBP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 NEUROG2Q9H2A3 272 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 CNOT8Q9UFF9 292 aaKnown RBP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 EZRP15311 586 aaKnown RBP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 KCNMA1Q12791 1236 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 HGSNATQ68CP4 663 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 CENPPQ6IPU0 288 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 HIBCHQ6NVY1 386 aaPredicted RBP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 DONSONQ9NYP3 566 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 SAP30BPQ9UHR5 308 aaKnown RBP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 LEMD3Q9Y2U8 911 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 MSL1Q68DK7 614 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 ZNF572Q7Z3I7 529 aaPredicted RBP22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 USP38Q8NB14 1042 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 TCP11Q8WWU5 503 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 C7orf25Q9BPX7 421 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 UBA5Q9GZZ9 404 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 GGT7Q9UJ14 662 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 ATP8A1Q9Y2Q0 1164 aa22.05■■□□□ 1.12
PPP1R3F-201ENST00000055335 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 BAZ2AQ9UIF9 1905 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 KRIT1O00522 736 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 NEBLO76041 1014 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 FGFR1OPO95684 399 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 HNRNPH3P31942 346 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 FUKQ8N0W3 1084 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 TPX2Q9ULW0 747 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 FLT1P17948 1338 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 SART1O43290 800 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 SKAP2O75563 359 aaPredicted RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 CLTAP09496 248 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 ITGA4P13612 1032 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 DHX9Q08211 1270 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 RNF10Q8N5U6 811 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 RAPGEF5Q92565 580 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 LARP4BQ92615 738 aaKnown RBP22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 SPAG5Q96R06 1193 aa22.04■■□□□ 1.12
PPP1R3F-201ENST00000055335 KLRF2D3W0D1 207 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 ACTN1P12814 892 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 ZNF844Q08AG5 666 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 SNX29Q8TEQ0 813 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 DDX12PQ92771 950 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 NUDT12Q9BQG2 462 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 IL17RBQ9NRM6 502 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms