RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 KCNJ12Q14500 433 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 KRT31Q15323 416 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 IRF2BP1Q8IU81 584 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 GUF1Q8N442 669 aaKnown RBP15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 KIAA0895Q8NCT3 520 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 WRNIP1Q96S55 665 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 BMP2KQ9NSY1 1161 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 KIAA1024Q9UPX6 916 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 MAPK8IP1Q9UQF2 711 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 SMCHD1A6NHR9 2005 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 MEIS1O00470 390 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 PLA2G4BP0C869 781 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 SPATA31C1P0DKV0 1188 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 STAT3P40763 770 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 PMS1P54277 932 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 SETQ01105 290 aaPredicted RBP15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 CENPPQ6IPU0 288 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 NIPA1Q7RTP0 329 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 CATSPER3Q86XQ3 398 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 DUSP9Q99956 384 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 TANGO6Q9C0B7 1094 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 FHDC1Q9C0D6 1143 aaPredicted RBP15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 SSC5DA1L4H1 1573 aa15.98■□□□□ 0.15
RTFDC1-201ENST00000023939 FRMPD4Q14CM0 1322 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 POTEB3A0JP26 581 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 POTECB2RU33 542 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 ZBED4O75132 1171 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 PSMD10O75832 226 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 FLOT1O75955 427 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 BCRP11274 1271 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 FCER1AP12319 257 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 MUTP22033 750 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 COPB1P53618 953 aaKnown RBP15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 PPP2R5CQ13362 524 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 POTEBQ6S5H4 581 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 RPAP3Q9H6T3 665 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 TEX33O43247 280 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 SLC12A3P55017 1021 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 OTOP1Q7RTM1 612 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 DYMQ7RTS9 669 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 KRT26Q7Z3Y9 468 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 ZKSCAN4Q969J2 545 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 TRIM47Q96LD4 638 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 MAF1Q9H063 256 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 ADAMTS5Q9UNA0 930 aa15.97■□□□□ 0.15
RTFDC1-201ENST00000023939 E9PMD0 336 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 CYP11B2P19099 503 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 OAZ1P54368 228 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 ANKRD40Q6AI12 368 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 FAM114A1Q8IWE2 563 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 CCAR2Q8N163 923 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.96■□□□□ 0.153e-6■■■□□ 15.4
RTFDC1-201ENST00000023939 HSD17B14Q9BPX1 270 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 SRRTQ9BXP5 876 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 WDR11Q9BZH6 1224 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 TUFT1Q9NNX1 390 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 DNM3Q9UQ16 869 aa15.96■□□□□ 0.15
RTFDC1-201ENST00000023939 VWA5AO00534 786 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 NFIBO00712 420 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 N4BP3O15049 544 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 COBLO75128 1261 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 LRRC63Q05C16 580 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 COASYQ13057 564 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 B3GNT9Q6UX72 402 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 TMEM139Q8IV31 216 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 CCDC65Q8IXS2 484 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 CSGALNACT2Q8N6G5 542 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 SYT2Q8N9I0 419 aaPredicted RBP15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 TC2NQ8N9U0 490 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 RIT2Q99578 217 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 MXRA8Q9BRK3 442 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 SEMA6BQ9H3T3 888 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 RAVER2Q9HCJ3 691 aaKnown RBP15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 SLC39A2Q9NP94 309 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 PARP14Q460N5 1801 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 PHIPQ8WWQ0 1821 aa15.95■□□□□ 0.14
RTFDC1-201ENST00000023939 POTEFA5A3E0 1075 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 POTEIP0CG38 1075 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 IDEP14735 1019 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 DGKZQ13574 1117 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 LRCH2Q5VUJ6 765 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 PCNX4Q63HM2 1172 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 POTEGQ6S5H5 508 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 POTEEQ6S8J3 1075 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 GPBP1Q86WP2 473 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 REPS2Q8NFH8 660 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 SYTL5Q8TDW5 730 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 PANX2Q96RD6 677 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 EIF2AK1Q9BQI3 630 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 PANK4Q9NVE7 773 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 COL20A1Q9P218 1284 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms