RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 REXO1Q8N1G1 1221 aaKnown RBP15.5■□□□□ 0.07
USH1C-201ENST00000005226 RNPC3Q96LT9 517 aaKnown RBP15.5■□□□□ 0.07
USH1C-201ENST00000005226 LSM14BQ9BX40 385 aaKnown RBP15.5■□□□□ 0.07
USH1C-201ENST00000005226 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 NPHP3-ACAD11A0A0J9YXS1 232 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 GNA11P29992 359 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 CDK8P49336 464 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 CCDC40Q4G0X9 1142 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 PTF1AQ7RTS3 328 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 CCDC84Q86UT8 332 aaPredicted RBP15.5■□□□□ 0.07
USH1C-201ENST00000005226 NBPF5PQ86XG9 351 aaPredicted RBP15.5■□□□□ 0.07
USH1C-201ENST00000005226 CASKIN2Q8WXE0 1202 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 MTMR9Q96QG7 549 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 ANKIB1Q9P2G1 1089 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
USH1C-201ENST00000005226 KIAA1551Q9HCM1 1747 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 SHTN1A0MZ66 631 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 ERLIN2O94905 339 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 UBE2SQ16763 222 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 CFAP221Q4G0U5 840 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 FAM83BQ5T0W9 1011 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 EMBQ6PCB8 327 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 GUF1Q8N442 669 aaKnown RBP15.49■□□□□ 0.07
USH1C-201ENST00000005226 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 SCN7AQ01118 1682 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 NDUFAB1O14561 156 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 PJA2O43164 708 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 SEC24CP53992 1094 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 CFAP58Q5T655 872 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 PIK3R5Q8WYR1 880 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 RAD54LQ92698 747 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 CENPHQ9H3R5 247 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
USH1C-201ENST00000005226 A0A087X0T9 212 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 FAM228BP0C875 321 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 TNNI2P48788 182 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 ITIH3Q06033 890 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 RAPGEF1Q13905 1077 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 ALS2CLQ60I27 953 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 CLEC4GQ6UXB4 293 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 SPZ1Q9BXG8 430 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 FAM107BQ9H098 131 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 MYH1P12882 1939 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 SFMBT2Q5VUG0 894 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 IFT20Q8IY31 132 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 IQCKQ8N0W5 287 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 FAM133AQ8N9E0 248 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 CAVIN3Q969G5 261 aa15.48■□□□□ 0.07
USH1C-201ENST00000005226 SPTY2D1Q68D10 685 aaPredicted RBP15.47■□□□□ 0.07
USH1C-201ENST00000005226 DDX42Q86XP3 938 aaKnown RBP eCLIP15.47■□□□□ 0.07
USH1C-201ENST00000005226 LRRC47Q8N1G4 583 aaKnown RBP15.47■□□□□ 0.07
USH1C-201ENST00000005226 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 PVALEFA0A1B0GWK0 134 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 ACTN1P12814 892 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 SEMA3FQ13275 785 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 NFIXQ14938 502 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 KIAA0753Q2KHM9 967 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 SLC9C1Q4G0N8 1177 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 OR2W6PQ8NHA6 318 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 GDF3Q9NR23 364 aa15.47■□□□□ 0.07
USH1C-201ENST00000005226 E9PMD0 336 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 INPP5BP32019 993 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 PPP1R2P41236 205 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 COASYQ13057 564 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 SLC10A5Q5PT55 438 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 MYOCDQ8IZQ8 938 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 SETDB2Q96T68 719 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 ZHX3Q9H4I2 956 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 COL4A3BPQ9Y5P4 624 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 LAMB1P07942 1786 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 RAD51CO43502 376 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 BAG3O95817 575 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 EPB41P11171 864 aaKnown RBP15.46■□□□□ 0.07
USH1C-201ENST00000005226 TM4SF1P30408 202 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 BTDP43251 543 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 KRT79Q5XKE5 535 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 GBP6Q6ZN66 633 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 TSG101Q99816 390 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 LZTS2Q9BRK4 669 aa15.46■□□□□ 0.07
USH1C-201ENST00000005226 FGFR1OPO95684 399 aaKnown RBP15.45■□□□□ 0.06
USH1C-201ENST00000005226 HPDP32754 393 aaPredicted RBP15.45■□□□□ 0.06
USH1C-201ENST00000005226 SKOR1P84550 965 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 NAB2Q15742 525 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 COBLL1Q53SF7 1204 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 MAATS1Q7Z4T9 603 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 DNAJC19Q96DA6 116 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 PANK4Q9NVE7 773 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 MYO1FO00160 1098 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 MARCH6O60337 910 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 CPP00450 1065 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 SERPING1P05155 500 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 TMEM266Q2M3C6 531 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 TEX11Q8IYF3 940 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 AP1M1Q9BXS5 423 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 STK17AQ9UEE5 414 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 CAPN7Q9Y6W3 813 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms