RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Nxf2Q4ZGD8 691 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tbx2Q60707 711 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Phf20Q8BLG0 1010 aaKnown RBP10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pym1Q8CHP5 203 aaKnown RBP10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 MyripQ8K3I4 856 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dcaf8Q8N7N5 591 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ddah1Q9CWS0 285 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 PdhbQ9D051 359 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ccdc78D3Z5T1 437 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Mettl14Q3UIK4 456 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nt5c2Q3V1L4 560 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Sycp1Q62209 993 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Apopt1Q9CQW7 192 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Serpinb3bQ9D1Q5 387 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Togaram1Q6A070 1776 aaKnown RBP10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rfpl4bJ3QPR6 266 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Mmp14P53690 582 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Zfp953Q3UPV7 304 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Vil1Q62468 827 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Trak2Q6P9N8 913 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 P2ry10Q8BFU7 328 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Csgalnact2Q8C1F4 542 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Setdb2Q8C267 713 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tcp11l2Q8K1H7 517 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Enox2Q8R0Z2 598 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tex21Q9R0U9 575 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cetn3O35648 167 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Mcm5P49718 733 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Mmp20P57748 482 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tdrd1Q99MV1 1172 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cwc15Q9JHS9 229 aaKnown RBP10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fem1bQ9Z2G0 627 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dock5B2RY04 1868 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cpb1B2RS76 415 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Il13ra2O88786 383 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Paxbp1P58501 919 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fbxo10Q7TQF2 950 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cd209bQ8CJ91 325 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nr3c2Q8VII8 978 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Anapc4Q91W96 807 aa10.57□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Vmn2r79E9Q067 851 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 PtgdrP70263 357 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fbln1Q08879 705 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Secisbp2lQ6A098 1086 aaKnown RBP10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Adam6bQ6IMH7 756 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Spata21Q8BHW6 681 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Maats1Q8BRC6 783 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pstpip2Q99M15 334 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tfr2Q9JKX3 798 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ugt1a8D3Z748 530 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ugt1a10E9PXN7 530 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Traf5P70191 558 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cnot7Q60809 285 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fam76aQ922G2 307 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dpp7Q9ET22 506 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Prl2c5Q9JLV9 222 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nsun7Q14AW5 724 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Znhit6Q3UFB2 460 aaKnown RBP10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cep112Q5PR68 954 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Gm11437Q5QR91 290 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Sv2cQ69ZS6 727 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Zfp397Q7TNK4 527 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Thap3Q8BJ25 218 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cep95Q8BVV7 827 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rcor2Q8C796 523 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ces4aQ8R0W5 563 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rab3il1Q8VDV3 383 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Kremen1Q99N43 473 aa10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Eef1gQ9D8N0 437 aaKnown RBP10.56□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 AoahO35298 574 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Surf1P09925 306 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rpl13P47963 211 aaKnown RBP10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ap5z1Q3U829 807 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Oog3Q3UWY1 500 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rsad1Q5SUV1 442 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Exoc3Q6KAR6 755 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Epn1Q80VP1 575 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Havcr2Q8VIM0 281 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Odf2A3KGV1 830 aaKnown RBP10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 L1camP11627 1260 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Sh3bp1P55194 680 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Krt9Q6RHW0 743 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rasal3Q8C2K5 1041 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ndst4Q9EQW8 872 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tjp3Q9QXY1 905 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 DexiQ9WUQ7 95 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Card6E9PWH2 1175 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rad23aP54726 363 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tcerg1lQ3B807 590 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ctdp1Q7TSG2 960 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Maip1Q8BHE8 291 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 PccaQ91ZA3 724 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Josd2Q9CR30 188 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 RnmtQ9D0L8 465 aaKnown RBP10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 CoasyQ9DBL7 563 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pex11aQ9Z211 246 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ccdc88aQ5SNZ0 1873 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Arhgap6O54834 987 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pafah1b1P63005 410 aaKnown RBP10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Mier3Q3UHF3 551 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms