RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Mxd3Q80US8 206 aa17.39■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Zc3h6Q8BYK8 1177 aa17.39■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Trim60Q8VI40 466 aa17.39■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 L1camP11627 1260 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Nr1d1Q3UV55 615 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Znf532Q6NXK2 1036 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Usp28Q5I043 1051 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Arhgap42B2RQE8 841 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm1661E9Q963 441 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Cd22P35329 862 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Stx2Q00262 289 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Avpr1aQ62463 423 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Prr18Q6PAN7 307 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm2163Q6PCY5 473 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Rbm41Q8JZV4 413 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Frmd4bQ920B0 1035 aa17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pacsin2Q9WVE8 486 aaKnown RBP17.39■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Lcmt1A0A0U1RNF2 332 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Nfx1B1AY10 1114 aaKnown RBP17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 D830030K20RikE9PYQ5 218 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm3043K7N693 218 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm16440K7N6G6 218 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm2244L7N2A3 218 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm3278L7N2D2 218 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm8271L7N2E2 218 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Alppl2P24823 529 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Atp8a1P70704 1164 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Yipf3Q3UDR8 347 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pank4Q80YV4 820 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Dhx58Q99J87 678 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Ppfia4B8QI36 1187 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 HlfQ8BW74 295 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Rabep2Q91WG2 554 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Eef1gQ9D8N0 437 aaKnown RBP17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Prg3Q9JL95 222 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Myo1gQ5SUA5 1024 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Ccdc87Q8CDL9 855 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pus7lQ8CE46 702 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 HdlbpQ8VDJ3 1268 aaKnown RBP17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Nuf2Q99P69 463 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Hace1Q3U0D9 909 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Jade1Q6ZPI0 834 aaKnown RBP17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Epn1Q80VP1 575 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Morc2bQ8C5W4 1022 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Spata4Q8K3V1 295 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Dhx30Q99PU8 1217 aaKnown RBP17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pck1Q9Z2V4 622 aa17.38■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 RcvrnP34057 202 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Cep85Q8BMK0 761 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 AsphQ8BSY0 741 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Rbbp5Q8BX09 538 aaKnown RBP17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 YarsQ91WQ3 528 aaKnown RBP17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Carmil3Q3UFQ8 1375 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pcdha4O88689 947 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Ctnnd1P30999 938 aaKnown RBP17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Hoxa13Q62424 386 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Arhgap10Q6Y5D8 786 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Parp10Q8CIE4 960 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Nfe2l3Q9WTM4 660 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Sik3Q6P4S6 1311 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Timm44O35857 452 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 LrmpQ60664 539 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 PigsQ6PD26 555 aaKnown RBP17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Kat14Q8CID0 779 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Syne4Q8CII8 388 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 FktnQ8R507 461 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Psip1Q99JF8 528 aaKnown RBP17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 AacsQ9D2R0 672 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Strn3Q9ERG2 796 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 IdeQ9JHR7 1019 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Adamts13Q769J6 1426 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 En2P09066 324 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Sept2P42208 361 aaKnown RBP17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Cnot7Q60809 285 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Sytl1Q99N80 567 aa17.37■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 YwhagP61982 247 aaKnown RBP17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Nkiras1Q8CEC5 192 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 StrbpQ91WM1 672 aaKnown RBP17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Adcy9P51830 1353 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Abcc10Q8R4P9 1501 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 HdxQ14B70 692 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Rnf207Q3V3A7 635 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pnma5Q5DTT8 618 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Krt5Q922U2 580 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 HnrnpcQ9Z204 313 aaKnown RBP17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Uhrf1bp1B2KF50 1429 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 XlrP05531 208 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Tmod1P49813 359 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 C87499Q3UX49 493 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Znf496Q5SXI5 585 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Ankrd6Q69ZU8 712 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Brd2Q7JJ13 798 aaKnown RBP17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Nrbp2Q91V36 499 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Pcdhb15Q91Y04 786 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Rfwd2Q9R1A8 733 aaKnown RBP17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Gm3415J3QMS8 315 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 ZfaP23607 742 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Igfbp4P47879 254 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Slc30a9Q5IRJ6 567 aa17.36■□□□□ 0.37
Pcdh1-203ENSMUST00000160721 Klhl14Q69ZK5 630 aa17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms