RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 2310003L06RikQ9CV82 495 aa20.02■□□□□ 0.79
Sort1-203ENSMUST00000135636 Telo2Q9DC40 840 aaKnown RBP20.02■□□□□ 0.79
Sort1-203ENSMUST00000135636 Timm44O35857 452 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Psmc5P62196 406 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 SrlQ7TQ48 910 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Rps6ka4Q9Z2B9 773 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Cul4bA2A432 970 aaKnown RBP20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 PhbP67778 272 aaKnown RBP20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Fkbp3Q62446 224 aaKnown RBP20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Pan2Q8BGF7 1200 aaKnown RBP20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Me3Q8BMF3 604 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ppfia2Q8BSS9 1257 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Aldh18a1Q9Z110 795 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Krt39Q6IFX4 482 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Hacd3Q8K2C9 362 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Sumf1Q8R0F3 372 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ppp6r3Q922D4 844 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Nr2e3Q9QXZ7 395 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Fem1bQ9Z2G0 627 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ncoa4Q5U4H9 625 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Gm10093D3YYI8 482 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Hdac1O09106 482 aaKnown RBP20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 Gbp9Q8BTS3 619 aa20.01■□□□□ 0.79
Sort1-203ENSMUST00000135636 ByslO54825 436 aaKnown RBP20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Hpcal4Q8BGZ1 191 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Trim54Q9ERP3 366 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Nphp4P59240 1425 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Bcar1Q61140 874 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Fam43aQ8BUP8 424 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Pnpt1Q8K1R3 783 aaKnown RBP20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Pcdha7Q91Y13 937 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Mis12Q9CY25 206 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Snx1Q9WV80 522 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Sorbs1Q62417 1290 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ces1eQ64176 562 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Fam114a2Q8VE88 497 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Med7Q9CZB6 233 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Kdm3bQ6ZPY7 1562 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Tcof1O08784 1320 aaKnown RBP20■□□□□ 0.79
Sort1-203ENSMUST00000135636 AF366264G3X9P9 502 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Zhx1P70121 873 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Slc27a1Q60714 646 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ezh2Q61188 746 aaKnown RBP20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Frmd4aQ8BIE6 1020 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Armc6Q8BNU0 468 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Pcdha12Q91Y18 950 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Dach1Q9QYB2 751 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 B3galt4Q9Z0F0 371 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Cnksr1A2A9K7 700 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Dnaaf5B9EJR8 853 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Enc1O35709 589 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Gnrh1P13562 90 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Cabs1Q8C633 391 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Lonp1Q8CGK3 949 aaKnown RBP20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Appl1Q8K3H0 707 aa20■□□□□ 0.79
Sort1-203ENSMUST00000135636 Usp54Q8BL06 1588 aaKnown RBP20■□□□□ 0.79
Sort1-203ENSMUST00000135636 IqcmQ149I8 489 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Cep63Q3UPP8 700 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Palm2Q8BR92 376 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 CalcbQ99MP3 130 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Sapcd2Q9D818 391 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Taf1bP97358 586 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Tbc1d31Q6NXY1 996 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Pbrm1Q8BSQ9 1634 aaKnown RBP19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 GabrdP22933 449 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Sparcl1P70663 650 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Map3k10Q66L42 940 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ccdc154Q6RUT8 657 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Rpa3Q9CQ71 121 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Filip1Q9CS72 1211 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ccdc103Q9D9P2 237 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Lrrc46Q9DAP0 323 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Map3k4O08648 1597 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Vmn2r121A2BE32 847 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 2610008E11RikG3X964 669 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Gm14685Q52KH6 695 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 E4f1Q8CCE9 783 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 U2af2P26369 475 aaKnown RBP19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ift81O35594 676 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Slc16a1P53986 493 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Slc7a14Q8BXR1 771 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Angel2Q8K1C0 544 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Mlc1Q8VHK5 382 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 AnkarA2RT91 1465 aa19.99■□□□□ 0.79
Sort1-203ENSMUST00000135636 Bpifb4A2BGH0 617 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Cd3dP04235 173 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ccdc153P0C7Q1 202 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Trmt10cQ3UFY8 414 aaKnown RBP19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Ovgp1Q62010 721 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Utp14bQ6EJB6 756 aaKnown RBP19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Eaf2Q91ZD6 262 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Vmp1Q99KU0 406 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Abca5Q8K448 1642 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Krt90E9Q1Z0 538 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Senp1P59110 640 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Zfp397Q7TNK4 527 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Slc51bQ80WK2 128 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 EtfbQ9DCW4 255 aaKnown RBP19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Olfr1354E9Q5G9 310 aa19.98■□□□□ 0.79
Sort1-203ENSMUST00000135636 Pnma5Q5DTT8 618 aa19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms