RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Mybpc2Q5XKE0 1136 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Samhd1Q60710 627 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Mre11Q61216 706 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Antxr2Q6DFX2 487 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Pramel7Q810Y8 479 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Ccar2Q8VDP4 922 aaKnown RBP34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 GneQ91WG8 722 aaKnown RBP34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Ankrd54Q91WK7 299 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 NapaQ9DB05 295 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 PycardQ9EPB4 193 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Krt85Q9Z2T6 507 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Cops5O35864 334 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Hoxc13P50207 328 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Wdr93Q402B2 695 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Gas7Q60780 421 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Cyfip1Q7TMB8 1253 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Bcas3Q8CCN5 928 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Atp2a1Q8R429 994 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Pkp2Q9CQ73 795 aaKnown RBP34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Ccer1Q9CQL2 403 aa34.34■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 KhsrpQ3U0V1 748 aaKnown RBP34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Zfp943Q6NZP4 507 aa34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Btbd7Q8CFE5 1130 aa34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Krt23Q99PS0 422 aa34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 EdnrbP48302 442 aa34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Sptlc2P97363 560 aaKnown RBP34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 C87499Q3UX49 493 aa34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Col4a3bpQ9EQG9 624 aa34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Maged1Q9QYH6 775 aaKnown RBP34.33■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Barx2O08686 283 aa34.32■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Gga3Q8BMI3 718 aa34.32■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Sgpl1Q8R0X7 568 aa34.32■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Mmtag2Q99LX5 260 aaKnown RBP34.32■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Map2k1P31938 393 aa34.31■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Cyp26b1Q811W2 512 aa34.31■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 NkrfQ8BY02 690 aaKnown RBP34.31■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Vmn1r203Q8R273 311 aa34.31■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Ddx39aQ8VDW0 427 aaKnown RBP34.31■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Smchd1Q6P5D8 2007 aaKnown RBP34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Gm3095E9Q058 166 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Gpatch11Q3UFS4 262 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Arhgap1Q5FWK3 439 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 GypcQ78HU7 95 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Tekt1Q9DAJ2 418 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Eif2ak1Q9Z2R9 619 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 RarbP22605 482 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Usp28Q5I043 1051 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Prpf40bQ80W14 870 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Arhgef19Q8BWA8 802 aa34.3■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Pitpnm1O35954 1243 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Ppp2r5cQ60996 524 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Ppp1r26Q6A025 1163 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 IqcgQ80W32 419 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Ifih1Q8R5F7 1025 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Med24Q99K74 987 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Iqca1Q9CUL5 857 aa34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Xrn2Q9DBR1 951 aaKnown RBP34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Fxr2Q9WVR4 673 aaKnown RBP34.29■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Tlk2O55047 718 aa34.28■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 3830417A13RikQ8BQJ2 303 aa34.28■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Lrrd1Q8C0R9 853 aa34.28■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 BcamQ9R069 622 aa34.28■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Gm5134E9QAB5 671 aa34.27■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Lmbrd1Q8K0B2 537 aa34.27■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Ccdc112A0AUP1 442 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 TroapB7ZNG4 668 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Mov10P23249 1004 aaKnown RBP34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Lmntd2Q0VET5 664 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Ces4aQ8R0W5 563 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Slc25a38Q91XD8 326 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Dph6Q9CQ28 267 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Eif4e3Q9DBB5 207 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Lmbr1Q9JIT0 490 aa34.26■■■■□ 3.08
Ctdnep1-201ENSMUST00000108593 Phka1P18826 1241 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Mettl14Q3UIK4 456 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Crhr2Q60748 411 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Cep85Q8BMK0 761 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Phtf2Q8CB19 747 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 GldcQ91W43 1025 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Xpo5Q924C1 1204 aaKnown RBP34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Mrps25Q9D125 171 aaKnown RBP34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Snrnp35Q9D384 244 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Cntn6Q9JMB8 1028 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Igbp1bQ9QZ29 343 aa34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Mrvi1Q9WUX5 899 aaKnown RBP34.26■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Pramel3A2AHA7 463 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Gm7903A2AWL1 463 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 AV320801A2AWL3 467 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Gm15023L7MUB4 467 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Dph1Q5NCQ5 438 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Krt9Q6RHW0 743 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Me2Q99KE1 589 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Acot9Q9R0X4 439 aaKnown RBP34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Plxnb3Q9QY40 1902 aa34.25■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Actr2P61161 394 aa34.24■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Ddr2Q62371 854 aa34.24■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Ces1eQ64176 562 aa34.24■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Ube2q1Q7TSS2 422 aa34.24■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 Bmp3Q8BHE5 468 aa34.24■■■■□ 3.07
Ctdnep1-201ENSMUST00000108593 MafgO54790 162 aa34.23■■■■□ 3.07
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms