RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Nlrp9cQ66X01 1004 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Zfp397Q7TNK4 527 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Calhm4Q8CE93 315 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tcp11l2Q8K1H7 517 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Exoc1Q8R3S6 894 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tmx1Q8VBT0 278 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ciapin1Q8WTY4 309 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Prkab1Q9R078 270 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 IkQ9Z1M8 557 aaKnown RBP12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Pcdh11xF6ZNL5 1338 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Akr1b8P45377 316 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Nedd4P46935 887 aaKnown RBP12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Psmb7P70195 277 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tigd5Q499M4 642 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Slc10a5Q5PT54 434 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Dnph1Q80VJ3 173 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ms4a5Q810P8 197 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 PaoxQ8C0L6 504 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tmem63cQ8CBX0 802 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Slc4a8Q8JZR6 1089 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Alpk1Q9CXB8 1231 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 UtrnE9Q6R7 3430 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Gm5580A0A0N4SVP8 411 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Dnaaf5B9EJR8 853 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Zfand4D3Z3C6 739 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Olfr247E9PVJ7 320 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ccdc121E9Q6D3 323 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Olfr819K7N727 320 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Myo1aO88329 1043 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Slc27a3O88561 667 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Stim1P70302 685 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Jakmip3Q5DTN8 844 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Vmn1r209Q5NC97 312 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Trim25Q61510 634 aaKnown RBP12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Kdm1aQ6ZQ88 853 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Etf1Q8BWY3 437 aaKnown RBP12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tdrd7Q8K1H1 1086 aaKnown RBP12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ushbp1Q8R370 680 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ttc5Q99LG4 440 aa12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Chchd3Q9CRB9 227 aaKnown RBP12.53□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Grik3B1AS29 919 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Psmc1P62192 440 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Apba2P98084 750 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Stxbp3Q60770 592 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 B4galnt4Q766D5 1034 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tmem134Q8R0J4 195 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Oxnad1Q8VE38 311 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Polr3cQ9D483 533 aa12.52□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Gm5934D3Z4U6 212 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 RargP18911 458 aaKnown RBP12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tal1P22091 329 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Man1a2P39098 641 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Nol4P60954 483 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Scfd1Q8BRF7 639 aaKnown RBP12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Agap3Q8VHH5 910 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Trex1Q91XB0 314 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Kremen1Q99N43 473 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Mfap3lQ9D3X9 409 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Borcs6Q9D6W8 360 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 CnpP16330 420 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Hoxa2P31245 372 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Mnat1P51949 309 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Rasa2P58069 847 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Epas1P97481 874 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Lrrfip1Q3UZ39 729 aaKnown RBP12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Fkbp3Q62446 224 aaKnown RBP12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Spata32Q8C5V0 334 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 4930550L24RikQ99PA7 320 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Slc5a5Q99PN0 618 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Abhd2Q9QXM0 425 aa12.52□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Clrn2B2RVW2 232 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc191J3QQ27 883 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Gng11P61953 73 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Mrps31Q61733 384 aaKnown RBP12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Fbxo38Q8BMI0 1194 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Riox2Q8CD15 465 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tmem79Q9D709 391 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Spaca1Q9DA48 305 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Fxr2Q9WVR4 673 aaKnown RBP12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Prl2c3P04768 224 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Kif5cP28738 956 aaKnown RBP12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 KhsrpQ3U0V1 748 aaKnown RBP12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Slc2a13Q3UHK1 637 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Trpc1Q61056 793 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ptger2Q62053 362 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc189Q6NZQ0 333 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Olfr832Q7TRG9 312 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Gpt2Q8BGT5 522 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Yars2Q8BYL4 472 aaKnown RBP12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Arhgef6Q8K4I3 771 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Vps18Q8R307 973 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 NapaQ9DB05 295 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Azi2Q9QYP6 405 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 GsdmeQ9Z2D3 512 aa12.51□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Psmd14O35593 310 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Pcif1P59114 706 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Prr7Q3V0I2 269 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Hoxa13Q62424 386 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Q8C5C9 218 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Krt79Q8VED5 531 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms