RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Serpinb3dQ6UKZ0 387 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Atp6v0d2Q80SY3 350 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nfat5Q9WV30 1534 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nedd4P46935 887 aaKnown RBP12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 StamP70297 548 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cyp2e1Q05421 493 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Mtus1Q5HZI1 1210 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Grm4Q68EF4 912 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tbc1d22bQ80VE5 505 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Pnpla2Q8BJ56 486 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Zcchc18Q8VD24 393 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tdrd3Q91W18 743 aaKnown RBP12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Magi2Q9WVQ1 1275 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Fgl2P12804 432 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Anks6Q6GQX6 883 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 HhatQ8BMT9 499 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nop56Q9D6Z1 580 aaKnown RBP12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gsta4P24472 222 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cst8P32766 142 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 GssP51855 474 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Polr2fP61219 127 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 RenbpP82343 430 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Akap4Q60662 849 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Naa35Q6PHQ8 725 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 D430041D05RikF6ZGR6 1678 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gm28510A0A087WP28 240 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rhbdl3P58873 404 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Pde1bQ01065 535 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Arglu1Q3UL36 271 aaKnown RBP12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 MlklQ9D2Y4 472 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 DonsonQ9QXP4 560 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 C5P06684 1680 aa12.96□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cul9Q80TT8 1865 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Apol6B7ZC55 329 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nhej1Q3KNJ2 295 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Iqcb1Q8BP00 598 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 4933409G03RikQ8C5U0 320 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fam161bQ8CB59 589 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Msantd4Q91YU3 345 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Mmrn2A6H6E2 943 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Exoc4O35382 975 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Lmntd2Q0VET5 664 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ckap2Q3V1H1 664 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Samhd1Q60710 627 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 AlcamQ61490 583 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Pabpc6Q9D4E6 643 aaKnown RBP12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Trpc5Q9QX29 975 aa12.96□□□□□ -0.34
Pcif1-201ENSMUST00000041643 N4bp2F8VQG7 1678 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Mon2Q80TL7 1715 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cyp2d10P24456 504 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Hps5P59438 1126 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ppp4cP97470 307 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nek5Q7TSC3 627 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Rapgef5Q8C0Q9 814 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Myef2Q8C854 591 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 C130026I21RikQ8C898 291 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Spata4Q8K3V1 295 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Arfgap2Q99K28 520 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Mtfr1lQ9CWE0 289 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Rbp7Q9EPC5 134 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Chd4Q6PDQ2 1915 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm7168A0AUV4 508 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cdc25aP48964 514 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Plekhf1Q3TB82 279 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tmem59lQ7TNI2 337 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Amigo3Q8C2S7 508 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Creb3l3Q91XE9 479 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gbp7Q91Z40 638 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tor1aip1Q921T2 595 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 NptxrQ99J85 493 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Lonp2Q9DBN5 852 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Arhgef7Q9ES28 862 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 DgkiD3YWQ0 1071 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Zfp408H7BX78 710 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Slurp2P0DP59 97 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tsta3P23591 321 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Aimp1P31230 310 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Igfbp4P47879 254 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gjb4Q02738 266 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cog5Q8C0L8 829 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Spata16Q8C636 571 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Kbtbd4Q8R179 534 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Pcdhb12Q91Y07 789 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 H2afzP0C0S6 128 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 U2af2P26369 475 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 H2afvQ3THW5 128 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gprin1Q3UNH4 932 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 RimklbQ80WS1 387 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Kif2bQ8C0N1 668 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Spata2Q8K004 515 aa12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Bzw2Q91VK1 419 aaKnown RBP12.95□□□□□ -0.34
Pcif1-201ENSMUST00000041643 TxnP10639 105 aaKnown RBP12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ms4a1P19437 291 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nek1P51954 1203 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Slc9a2Q3ZAS0 814 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Mei4Q8BRM6 389 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Grtp1Q9D3N8 359 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 4931423N10RikQ9D4J9 382 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm15262A0A140LIQ5 728 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 A0A286YCQ6 122 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms