RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 EnahQ03173 802 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Nr1d1Q3UV55 615 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Birc2Q62210 612 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mettl24Q8CCB5 363 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gbp7Q91Z40 638 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Zc3h13E9Q784 1729 aaKnown RBP11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Fxr1Q61584 677 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 CrkQ64010 304 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Eif3cQ8R1B4 911 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 BbxQ8VBW5 907 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ces1Q8VCC2 565 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tmem192Q9CXT7 266 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Llcfc1Q9D9P8 108 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Herc3A6H6S0 1050 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gad1P48318 593 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Asap3Q5U464 904 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ube2oQ6ZPJ3 1288 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Lca5Q80ST9 704 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rimbp2Q80U40 1072 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Phf23Q8BSN5 401 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Defb15Q8R2I5 79 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ndufb9Q9CQJ8 179 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ubxn8Q9QZ49 277 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Pnpla7A2AJ88 1352 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Spef2Q8C9J3 1734 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 IkbkbO88351 757 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Pla2g4bP0C871 782 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Spag7Q7TNE3 227 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Spdl1Q923A2 608 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Myo1hQ9D6A1 958 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 CpdO89001 1377 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ankrd63A2ARS0 390 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Nmt2O70311 529 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 PrphP15331 475 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Dpcr1Q3TNW5 500 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ddx49Q4FZF3 480 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Krt74Q6IFZ9 495 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 AmphQ7TQF7 686 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 H6pdQ8CFX1 789 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Slc12a8Q8VI23 705 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cd248Q91V98 765 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Med15Q924H2 789 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Nek3Q9R0A5 511 aa11.19□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cfap221A9Q751 836 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpina16D3Z660 418 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm4841E9QAA8 417 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Stk10O55098 966 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 SpertQ32MG2 446 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm3414Q3TNU4 584 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Qrich1Q3UA37 777 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Meis1Q60954 390 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Wdr44Q6NVE8 915 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Kcnf1Q7TSH7 493 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cacnb1Q8R3Z5 597 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gpsm2Q8VDU0 679 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 MgarpQ8VI64 283 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Coa7Q921H9 231 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Zfp94E9Q6Y4 486 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Npy5rO70342 466 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Camk4P08414 469 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Pik3r1P26450 724 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Adcy7P51829 1099 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gcnt1Q09324 428 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Trim43aQ3TL54 445 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Impg2Q80XH2 1243 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Sgsm1Q8BPQ7 1093 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 SowahdQ8BY98 327 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Kat14Q8CID0 779 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Q8K2W9 541 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Osbpl1aQ91XL9 950 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rrp1bQ91YK2 724 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Dbndd2Q9CRD4 158 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Vps33aQ9D2N9 598 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Scyl1Q9EQC5 806 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gfpt2Q9Z2Z9 682 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm5936A2BG95 728 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm5640A3KG49 728 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mmrn2A6H6E2 943 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rasa2P58069 847 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Arhgef16Q3U5C8 713 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 TfrcQ62351 763 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Dcaf15Q6PFH3 600 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpinb3dQ6UKZ0 387 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Fermt3Q8K1B8 665 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Large1Q9Z1M7 756 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 CoblQ5NBX1 1337 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gm7168A0AUV4 508 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mageb2A2AHM0 380 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Aoc3O70423 765 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Setd4P58467 439 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Hace1Q3U0D9 909 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ppp1r7Q3UM45 361 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rassf10Q8BL43 508 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 E330017A01RikQ8BU47 192 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Usp15Q8R5H1 981 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 MlklQ9D2Y4 472 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Paip2Q9D6V8 124 aa11.18□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Aox3G3X982 1335 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Trappc11B2RXC1 1133 aa11.17□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tmod1P49813 359 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms