RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tsga10Q6NY15 697 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Zbed4Q80WQ9 1168 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Micall1Q8BGT6 870 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Klhl20Q8VCK5 604 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Smtnl1Q99LM3 459 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Sh2b2Q9JID9 621 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Plekhg2Q6KAU7 1340 aa14.79□□□□□ -0.04
Nup88-201ENSMUST00000035283 Gm4985A2ALC6 410 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Clcn6O35454 870 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Gna11P21278 359 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Gna15P30678 374 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Myo1fP70248 1099 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Tex11Q14AT2 947 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Rhpn1Q61085 643 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Git1Q68FF6 770 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Ccdc186Q8C9S4 917 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 OplahQ8K010 1288 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Bbs7Q8K2G4 715 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Onecut3Q8K557 490 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Abcf2Q99LE6 628 aaKnown RBP14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Ears2Q9CXJ1 523 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Tktl2Q9D4D4 627 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 2310002L09RikQ9D7L5 217 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Sept14Q9DA97 430 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Actn2Q9JI91 894 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Slc12a7Q9WVL3 1083 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Adgrf5G5E8Q8 1348 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Ap1m1P35585 423 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Asap3Q5U464 904 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Rbm26Q6NZN0 1012 aaKnown RBP14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Ttc7aQ8BGB2 858 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 3830417A13RikQ8BQJ2 303 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Krt79Q8VED5 531 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Klc3Q91W40 508 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Tsnaxip1Q99P25 704 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 NagaQ9QWR8 415 aa14.78□□□□□ -0.04
Nup88-201ENSMUST00000035283 Gm3893E9Q1I1 302 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Samd15F6XZJ7 620 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Lig3P97386 1015 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Lilrb3P97484 841 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Pstpip1P97814 415 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Fam183bQ5NC57 135 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 GartQ64737 1010 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Grm4Q68EF4 912 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Wdr44Q6NVE8 915 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Rhbdf1Q6PIX5 856 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Bsdc1Q80Y55 427 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Usp38Q8BW70 1042 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Lsm14bQ8CGC4 385 aaKnown RBP14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Mettl13Q91YR5 698 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 HibadhQ99L13 335 aaKnown RBP14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Mxra8Q9DBV4 442 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Slc5a4aQ9ET37 656 aa14.77□□□□□ -0.04
Nup88-201ENSMUST00000035283 Fgd3O88842 733 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Krt18P05784 423 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Il15P48346 162 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Eya3P97480 510 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 HelqQ2VPA6 1069 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Prpf38aQ4FK66 312 aaKnown RBP14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gas8Q60779 478 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Trpc6Q61143 930 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Actn1Q7TPR4 892 aaKnown RBP14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ankrd23Q812A3 306 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Cog5Q8C0L8 829 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Sde2Q8K1J5 448 aaKnown RBP14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 P3h4Q8K2B0 443 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Dnajc28Q8VCE1 385 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 CoasyQ9DBL7 563 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Prpf40aQ9R1C7 953 aaKnown RBP14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Map3k15A2AQW0 1331 aa14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 VirmaA2AIV2 1811 aaKnown RBP14.77□□□□□ -0.05
Nup88-201ENSMUST00000035283 Fam129cD3YZB0 591 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 ProcP33587 460 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Setd4P58467 439 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Pkn1P70268 946 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 VrtnQ3SYK4 740 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gdpd4Q3TT99 632 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tsg101Q61187 391 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Thap3Q8BJ25 218 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Lrrc4cQ8C031 640 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Csgalnact2Q8C1F4 542 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 TbcbQ9D1E6 244 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Saal1Q9D2C2 474 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Galntl5Q9D4M9 431 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Mzb1Q9D8I1 188 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Rsbn1lD3Z0K6 821 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Eps15P42567 897 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Irx1P81068 480 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 RelaQ04207 549 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tcerg1lQ3B807 590 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Fhdc1Q3ULZ2 1149 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Clul1Q3ZRW6 464 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Kctd16Q5DTY9 427 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Dennd2aQ8C4S8 1000 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Kctd10Q922M3 315 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Arfgap2Q99K28 520 aa14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Fxr2Q9WVR4 673 aaKnown RBP14.76□□□□□ -0.05
Nup88-201ENSMUST00000035283 Zfp408H7BX78 710 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 D1Pas1P16381 660 aa14.75□□□□□ -0.05
Nup88-201ENSMUST00000035283 Nedd4P46935 887 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 100.9 ms