RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Usp15Q8R5H1 981 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tekt2Q922G7 430 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Pik3c2aQ61194 1686 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Chmp6P0C0A3 200 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Nek1P51954 1203 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Myo1fP70248 1099 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Trim21Q62191 470 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Znf219Q6IQX8 726 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cyp26b1Q811W2 512 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cabs1Q8C633 391 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Fam161bQ8CB59 589 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Enox2Q8R0Z2 598 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cgref1Q8R1U2 281 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Mrps22Q9CXW2 359 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ddx23D3Z0M9 819 aaKnown RBP10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ccdc175E9PVB3 822 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Flot1O08917 428 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 CopeO89079 308 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 TchpQ3TVW5 497 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 1810065E05RikQ5NC41 235 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 HelbQ6NVF4 1074 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gm2163Q6PCY5 473 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Dtnbp1Q91WZ8 352 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Alpk1Q9CXB8 1231 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Syap1Q9D5V6 365 aa10.81□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Phlpp1Q8CHE4 1687 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Kcnb2A6H8H5 907 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Krt78E9Q0F0 1068 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Casp12O08736 419 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gucy2cQ3UWA6 1072 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ankrd13cQ3UX43 541 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tigd5Q499M4 642 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ezh2Q61188 746 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Hpcal4Q8BGZ1 191 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Atp1a1Q8VDN2 1023 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Acot11Q8VHQ9 594 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Rsph3bQ9DA80 389 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ulk4Q3V129 1303 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Krt24A1L317 512 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 DgkiD3YWQ0 1071 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Usp53P15975 1069 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 NfixP70257 488 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 MgarpQ8VI64 283 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Eif4a3Q91VC3 411 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 A0A1Y7VML8 143 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Zfp174B9EJW5 407 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Rsbn1lD3Z0K6 821 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gm6588E9Q3K0 461 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Pank4Q80YV4 820 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Trerf1Q8BXJ2 1205 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gtpbp10Q8K013 366 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Golph3lQ8R088 285 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Nxf1Q99JX7 618 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tnpo2Q99LG2 887 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ubr1O70481 1757 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cntnap1O54991 1385 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Adam7O35227 789 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tgfb2P27090 414 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Polr2fP61219 127 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Rnf207Q3V3A7 635 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Pcdhb14Q6PB90 796 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Dcaf15Q6PFH3 600 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Stk38lQ7TSE6 464 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Sap130Q8BIH0 1057 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 H6pdQ8CFX1 789 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Tmem60Q8K174 133 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ubxn2aQ99KJ0 258 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ndst4Q9EQW8 872 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Usp21Q9QZL6 566 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 SmapQ9R0P4 181 aaKnown RBP10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ror2Q9Z138 944 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 NalcnQ8BXR5 1738 aa10.8□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Pcdha4O88689 947 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Zc3h18Q0P678 948 aaKnown RBP10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Ccdc51Q3URS9 406 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gpr101Q80T62 511 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Daam2Q80U19 1115 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Acad11Q80XL6 779 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Gm28042B7ZCM9 1014 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Qrich1Q3UA37 777 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Sfi1Q3UZY0 1216 aaKnown RBP10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Birc2Q62210 612 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 GopcQ8BH60 463 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Kctd6Q8BNL5 237 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Defb15Q8R2I5 79 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Xpo5Q924C1 1204 aaKnown RBP10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Arl2bpQ9D385 163 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Hic2Q9JLZ6 619 aaKnown RBP10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 HnrnpcQ9Z204 313 aaKnown RBP10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Wfs1P56695 890 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Scnn1aQ61180 699 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 TbcbQ9D1E6 244 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Orc3Q9JK30 715 aaKnown RBP10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 GdaQ9R111 454 aa10.79□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Pik3caP42337 1068 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Snx25Q3ZT31 840 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Thrap3Q569Z6 951 aaKnown RBP10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Cyp7b1Q60991 507 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 F13a1Q8BH61 732 aa10.78□□□□□ -0.68
Ldlr-201ENSMUST00000034713 Rbbp5Q8BX09 538 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms