RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	SAG1	P20840	650 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	RAD14	P28519	371 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	MSN4	P33749	630 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	SOF1	P33750	489 aa	Known RBP	4.68	□□□□□ -1.66
LDB17	YDL146W	KKQ8	P36004	724 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	YKL070W	P36087	169 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	PTR3	P43606	678 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	NPA3	P47122	385 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	COQ6	P53318	479 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	YNL050C	P53952	270 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	YMR160W	Q03823	816 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	BOP2	Q06150	570 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	NDL1	Q06568	189 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	ARR1	Q06596	294 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	TSR1	Q07381	788 aa	Known RBP	4.68	□□□□□ -1.66
LDB17	YDL146W	YAP7	Q08182	245 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	VAM3	Q12241	283 aa		4.68	□□□□□ -1.66
LDB17	YDL146W	LEU4	P06208	619 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	WHI2	P12611	486 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	PMA2	P19657	947 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	RIM1	P32445	135 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	EFB1	P32471	206 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	HIR2	P32480	875 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	LHS1	P36016	881 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	RPF2	P36160	344 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	PXL1	P36166	706 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	ICS2	P38284	255 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	IMD2	P38697	523 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	TCD1	P38756	429 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	END3	P39013	349 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	ELO1	P39540	310 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	RPN11	P43588	306 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	GCD14	P46959	383 aa	Predicted RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	YHC3	P47040	408 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	GTO1	P48239	356 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	BRO1	P48582	844 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	ADE16	P54113	591 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	WAR1	Q03631	944 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	SMA2	Q04658	369 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	ADE13	Q05911	482 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	BCP1	Q06338	283 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	DIS3	Q08162	1001 aa	Known RBP	4.67	□□□□□ -1.66
LDB17	YDL146W	SRN2	Q99176	213 aa		4.67	□□□□□ -1.66
LDB17	YDL146W	SSA3	P09435	649 aa	Known RBP	4.66	□□□□□ -1.66
LDB17	YDL146W	PMR1	P13586	950 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	MSS116	P15424	664 aa	Known RBP	4.66	□□□□□ -1.66
LDB17	YDL146W	UGA1	P17649	471 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	NUP1	P20676	1076 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	SNU114	P36048	1008 aa	Known RBP	4.66	□□□□□ -1.66
LDB17	YDL146W	RPC37	P36121	282 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	ASC1	P38011	319 aa	Known RBP	4.66	□□□□□ -1.66
LDB17	YDL146W	YBR139W	P38109	508 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	ECM10	P39987	644 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	YJL070C	P40361	888 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	AIM20	P40451	204 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	ASN2	P49090	572 aa	Known RBP	4.66	□□□□□ -1.66
LDB17	YDL146W	MND1	P53102	219 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	YGL114W	P53134	725 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	SPO19	Q03029	223 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	YLR173W	Q06247	608 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	YDL242W	Q07746	117 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	LEA1	Q08963	238 aa	Predicted RBP	4.66	□□□□□ -1.66
LDB17	YDL146W	ATG9	Q12142	997 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	MED4	Q12343	284 aa		4.66	□□□□□ -1.66
LDB17	YDL146W	RPL7A	P05737	244 aa	Known RBP	4.65	□□□□□ -1.66
LDB17	YDL146W	YPK1	P12688	680 aa	Known RBP	4.65	□□□□□ -1.66
LDB17	YDL146W	GAL3	P13045	520 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	SPE2	P21182	396 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	ELO2	P25358	347 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	TMT1	P32643	299 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	NUP133	P36161	1157 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	TAX4	P47030	604 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	OCA2	P53949	197 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	EKI1	Q03764	534 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	GFD1	Q04839	188 aa	Known RBP	4.65	□□□□□ -1.66
LDB17	YDL146W	STE23	Q06010	1027 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	SMD2	Q06217	110 aa	Known RBP	4.65	□□□□□ -1.66
LDB17	YDL146W	BUG1	Q12191	341 aa		4.65	□□□□□ -1.66
LDB17	YDL146W	RPL7B	Q12213	244 aa	Known RBP	4.65	□□□□□ -1.66
LDB17	YDL146W	PGK1	P00560	416 aa	Known RBP	4.64	□□□□□ -1.67
LDB17	YDL146W	GPH1	P06738	902 aa	Known RBP	4.64	□□□□□ -1.67
LDB17	YDL146W	RNR2	P09938	399 aa	Known RBP	4.64	□□□□□ -1.67
LDB17	YDL146W	PCT1	P13259	424 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	RSR1	P13856	272 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	AMD2	P22580	549 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	GEX1	P25596	615 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	LAC1	P28496	418 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	KRE6	P32486	720 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	RIP-Chip
LDB17	YDL146W	YPT10	P38146	199 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	PET100	P38958	111 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	MNT4	P53745	580 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	UBP16	Q02863	499 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	YDR541C	Q03049	344 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	ERV41	Q04651	352 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	COQ9	Q05779	260 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	RTT109	Q07794	436 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	CRT10	Q08226	957 aa		4.64	□□□□□ -1.67
LDB17	YDL146W	PUT2	P07275	575 aa		4.63	□□□□□ -1.67
LDB17	YDL146W	YMR085W	P0CF18	432 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms